Strain Fitness in Pseudomonas simiae WCS417 around PS417_08525

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,860,778	+		PS417_08520	0.37	-0.7
1,860,778	+		PS417_08520	0.37	-0.5
1,860,779	-		PS417_08520	0.37	-1.3
1,861,117	-		PS417_08520	0.64	+0.2
1,861,139	+		PS417_08520	0.66	+0.2
1,861,268	+		PS417_08520	0.77	-0.4
1,861,268	+		PS417_08520	0.77	-0.6
1,861,269	-		PS417_08520	0.77	-0.0
1,861,269	-		PS417_08520	0.77	+0.3
1,861,269	-		PS417_08520	0.77	+0.6
1,861,301	+		PS417_08520	0.79	+0.0
1,861,301	+		PS417_08520	0.79	+0.6
1,861,301	+		PS417_08520	0.79	+0.5
1,861,302	-		PS417_08520	0.79	-0.1
1,861,302	-		PS417_08520	0.79	+0.1
1,861,319	+		PS417_08520	0.81	-0.5
1,861,319	+		PS417_08520	0.81	-0.1
1,861,319	+		PS417_08520	0.81	+0.6
1,861,427	-		PS417_08520	0.89	-0.9
1,861,665	-				+0.3
1,861,857	+		PS417_08525	0.14	-0.3
1,861,857	+		PS417_08525	0.14	+0.2
1,861,857	+		PS417_08525	0.14	-1.3
1,861,857	+		PS417_08525	0.14	+0.5
1,861,858	-				+0.7
1,861,858	-		PS417_08525	0.14	-0.4
1,862,256	+		PS417_08525	0.44	+0.0
1,862,298	+		PS417_08525	0.47	-1.1
1,862,298	+		PS417_08525	0.47	-2.0
1,862,299	-				+2.0
1,862,422	-		PS417_08525	0.56	-0.5
1,862,544	+		PS417_08525	0.65	-0.2
1,862,545	-		PS417_08525	0.65	-1.0
1,862,756	+		PS417_08525	0.81	-2.1
1,862,757	-		PS417_08525	0.81	-0.5
1,862,757	-		PS417_08525	0.81	+0.1
1,862,927	+				+0.6
1,862,928	-				+2.6
1,863,057	+				-0.8
1,863,058	-				-0.3
1,863,068	-				-0.6
1,863,068	-				+0.1
1,863,068	-				+0.3
1,863,264	+		PS417_08530	0.16	-0.7
1,863,264	+		PS417_08530	0.16	-2.4
1,863,299	+		PS417_08530	0.21	+1.5
1,863,300	-		PS417_08530	0.21	-0.6
1,863,498	-		PS417_08530	0.47	+0.5
1,863,498	-		PS417_08530	0.47	-2.2
1,863,498	-		PS417_08530	0.47	-1.2
1,863,498	-		PS417_08530	0.47	-2.5
1,863,500	-		PS417_08530	0.48	+0.3
1,863,569	+		PS417_08530	0.57	-1.5
1,863,569	+		PS417_08530	0.57	+0.7
1,863,570	-		PS417_08530	0.57	+2.0
1,863,719	+		PS417_08530	0.77	+0.1
1,863,795	+		PS417_08530	0.87	+0.4
1,863,894	-				-1.0
1,863,904	-				-0.9
1,863,907	+				-0.5
1,863,908	-				+1.8
1,863,908	-				-0.3
1,863,908	-				+0.3
1,863,908	-				-0.4