Strain Fitness in Pseudomonas simiae WCS417 around PS417_07405

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,631,348	-				-0.1
1,631,562	-				+0.5
1,631,800	+		PS417_07400	0.30	-1.1
1,631,800	+		PS417_07400	0.30	+2.5
1,631,800	+		PS417_07400	0.30	+0.2
1,631,803	+		PS417_07400	0.31	+0.1
1,632,091	+				-0.6
1,632,091	+				+0.4
1,632,092	-				+0.3
1,632,126	+				+1.7
1,632,126	+				+0.4
1,632,126	+				-0.4
1,632,127	-				+0.5
1,632,156	+				+0.3
1,632,156	+				+0.2
1,632,156	+				+0.5
1,632,156	+				-0.2
1,632,157	-				-0.2
1,632,157	-				-1.5
1,632,157	-				-0.1
1,632,157	-				-0.2
1,632,157	-				+0.1
1,632,157	-				+2.8
1,632,157	-				+0.1
1,632,157	-				-1.5
1,632,157	-				-2.4
1,632,157	-				-0.3
1,632,214	+				+0.2
1,632,215	-				-0.1
1,632,448	+		PS417_07405	0.26	+0.5
1,632,448	+		PS417_07405	0.26	+0.9
1,632,449	-		PS417_07405	0.26	+0.1
1,632,449	-		PS417_07405	0.26	-0.1
1,632,449	-		PS417_07405	0.26	+0.8
1,632,944	+		PS417_07405	0.67	-0.5
1,632,956	+		PS417_07405	0.68	+1.5
1,633,021	+		PS417_07405	0.73	+1.5
1,633,022	-		PS417_07405	0.73	+1.8
1,633,082	+		PS417_07405	0.78	+0.8
1,633,212	+		PS417_07405	0.89	-1.1
1,633,212	+		PS417_07405	0.89	-1.3
1,633,213	-		PS417_07405	0.89	+0.7
1,633,406	-				-1.2
1,633,452	-		PS417_07410	0.17	+2.0
1,633,452	-		PS417_07410	0.17	-1.0
1,633,452	-		PS417_07410	0.17	-0.7
1,633,543	+		PS417_07410	0.43	-1.2
1,633,714	+				+0.5
1,633,715	-				-0.3
1,633,763	-				+0.3
1,633,772	+				-1.7
1,633,773	-				-2.7
1,633,773	-				-1.4
1,633,814	+				-0.1
1,633,859	+		PS417_07415	0.10	+0.1
1,633,860	-		PS417_07415	0.11	-0.4
1,633,860	-		PS417_07415	0.11	+0.7
1,633,860	-				-0.5
1,633,913	+		PS417_07415	0.22	-0.4
1,633,913	+		PS417_07415	0.22	+0.3
1,633,914	-		PS417_07415	0.22	-0.3
1,633,979	+		PS417_07415	0.36	+1.1
1,633,979	+		PS417_07415	0.36	-0.3
1,634,003	+		PS417_07415	0.41	-0.1
1,634,168	+		PS417_07415	0.76	-1.5
1,634,241	+				+0.2
1,634,243	+				+0.1
1,634,244	-				-0.3
1,634,244	-				-0.3
1,634,244	-				-2.4
1,634,244	-				+0.4
1,634,244	-				-0.0
1,634,244	-				-0.6
1,634,309	+				-1.2