Strain Fitness in Pseudomonas simiae WCS417 around PS417_06415

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,420,507	+		PS417_06405	0.70	+0.2
1,420,507	+		PS417_06405	0.70	+2.1
1,420,531	+		PS417_06405	0.73	+0.5
1,420,531	+		PS417_06405	0.73	-0.3
1,420,532	-		PS417_06405	0.73	+1.0
1,420,537	+		PS417_06405	0.74	-0.1
1,420,537	+		PS417_06405	0.74	+0.5
1,420,557	+		PS417_06405	0.77	+1.9
1,420,680	-				+2.8
1,420,681	+				-0.2
1,420,682	-				+0.7
1,420,682	-				+0.7
1,420,700	-				+1.4
1,420,750	-				+0.6
1,420,804	-				-1.3
1,420,842	+		PS417_06410	0.17	-2.1
1,420,842	+		PS417_06410	0.17	-0.7
1,420,987	-		PS417_06410	0.37	-0.3
1,421,085	+		PS417_06410	0.50	-1.7
1,421,085	+		PS417_06410	0.50	-1.0
1,421,094	+		PS417_06410	0.52	+0.0
1,421,095	-		PS417_06410	0.52	-0.4
1,421,095	-		PS417_06410	0.52	-1.8
1,421,145	+		PS417_06410	0.59	+0.5
1,421,145	+		PS417_06410	0.59	-0.1
1,421,145	+		PS417_06410	0.59	-0.0
1,421,146	-		PS417_06410	0.59	-0.6
1,421,196	+		PS417_06410	0.66	-2.8
1,421,251	-		PS417_06410	0.73	-0.8
1,421,251	-		PS417_06410	0.73	+1.1
1,421,446	+				-0.5
1,421,446	+				-0.7
1,421,458	+				+0.1
1,421,506	-				-0.1
1,421,587	+		PS417_06415	0.11	+0.0
1,421,781	+		PS417_06415	0.36	-1.8
1,421,781	+		PS417_06415	0.36	+1.0
1,421,781	+		PS417_06415	0.36	-0.6
1,421,781	+		PS417_06415	0.36	+1.5
1,421,782	-		PS417_06415	0.36	-2.1
1,421,782	-		PS417_06415	0.36	-0.3
1,421,802	+		PS417_06415	0.38	+0.3
1,421,848	-		PS417_06415	0.44	-0.8
1,422,138	-		PS417_06415	0.81	-2.6
1,422,210	+				+0.7
1,422,211	-				+0.5
1,422,285	-				+0.9
1,422,285	-				-0.8
1,422,288	+				+0.6
1,422,289	-				+1.2
1,422,289	-				+1.1
1,422,335	+				-0.6
1,422,380	+				+0.2
1,422,380	+				+0.0
1,422,381	-				-0.2
1,422,428	+				+1.9
1,422,429	-				+0.6
1,422,429	-				-0.9
1,422,429	-				+0.5
1,422,508	-				-0.1
1,422,774	+		PS417_06420	0.15	-2.6
1,422,840	+		PS417_06420	0.19	+0.5
1,422,840	+		PS417_06420	0.19	+2.1
1,422,841	-		PS417_06420	0.19	+0.2
1,422,885	+		PS417_06420	0.22	+0.2
1,423,083	-		PS417_06420	0.34	-0.4
1,423,182	+		PS417_06420	0.40	-1.3
1,423,183	-		PS417_06420	0.40	+0.4