Strain Fitness in Pseudomonas simiae WCS417 around PS417_00615

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
125,165	+				+1.1
125,165	+				+0.0
125,166	-				+1.4
125,262	+		PS417_00610	0.13	-0.4
125,306	-		PS417_00610	0.18	+0.1
125,444	+		PS417_00610	0.32	+1.1
125,617	+		PS417_00610	0.51	+0.4
125,617	+		PS417_00610	0.51	+1.7
125,618	-		PS417_00610	0.51	-3.1
125,695	+		PS417_00610	0.59	-0.0
125,695	+		PS417_00610	0.59	+0.2
125,695	+		PS417_00610	0.59	+0.6
125,750	+		PS417_00610	0.65	-1.0
125,891	+		PS417_00610	0.80	+0.6
125,908	+		PS417_00610	0.81	+1.4
125,908	+		PS417_00610	0.81	-0.7
125,981	+		PS417_00610	0.89	-0.4
125,982	-		PS417_00610	0.89	+0.3
126,068	+				+0.1
126,182	+		PS417_00615	0.13	-1.4
126,182	+		PS417_00615	0.13	+1.5
126,182	+		PS417_00615	0.13	-0.2
126,183	-		PS417_00615	0.13	+0.6
126,183	-		PS417_00615	0.13	-0.3
126,183	-		PS417_00615	0.13	-1.2
126,210	+		PS417_00615	0.17	-1.5
126,210	+		PS417_00615	0.17	-0.7
126,211	-		PS417_00615	0.17	-0.1
126,211	-		PS417_00615	0.17	-0.7
126,281	+		PS417_00615	0.26	-0.3
126,575	-		PS417_00615	0.65	-0.3
126,952	+				+0.9
126,952	+				-0.1
126,952	+				+0.6
127,063	+				+2.6
127,064	-				-0.1
127,112	+				+1.8
127,137	+				+0.7
127,167	-				+1.4
127,432	+		PS417_00620	0.37	-0.0
127,433	-		PS417_00620	0.37	-3.2
127,478	-		PS417_00620	0.43	+1.1
127,506	-		PS417_00620	0.47	-1.3
127,506	-		PS417_00620	0.47	+1.2
127,506	-		PS417_00620	0.47	+0.6
127,594	+		PS417_00620	0.60	+0.6
127,595	-		PS417_00620	0.60	-1.3
127,833	-				+0.3
127,833	-				+0.0