Strain Fitness in Pseudomonas simiae WCS417 around PS417_06005

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
1,334,846	+				+0.5
1,334,854	+				+0.7
1,334,854	+				+0.6
1,334,854	+				+2.2
1,334,854	+				+0.7
1,336,459	-				-0.4
1,336,459	-				-0.1
1,336,459	-				+0.2
1,336,520	+				-1.0
1,336,520	+				-0.8
1,336,521	-				+1.3
1,336,760	+		PS417_06010	0.31	-0.4
1,336,760	+		PS417_06010	0.31	+0.5
1,336,880	+		PS417_06010	0.48	-0.2
1,336,946	+		PS417_06010	0.57	-0.8
1,336,946	+		PS417_06010	0.57	+1.3
1,336,946	+		PS417_06010	0.57	-1.3
1,336,947	-		PS417_06010	0.57	-0.2
1,337,160	-		PS417_06010	0.87	-1.6
1,337,225	+				+1.5
1,337,274	+				+1.5
1,337,274	+				-2.0
1,337,424	-				+0.5