Strain Fitness in Pseudomonas simiae WCS417 around PS417_00475

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
93,122	+		PS417_00470	0.33	-0.3
93,289	-		PS417_00470	0.46	-1.1
93,495	+		PS417_00470	0.61	+0.0
93,628	-		PS417_00470	0.71	+0.7
93,628	-		PS417_00470	0.71	+0.1
93,663	+		PS417_00470	0.74	+1.4
93,663	+		PS417_00470	0.74	+2.5
93,664	-		PS417_00470	0.74	-1.6
93,664	-		PS417_00470	0.74	-1.1
93,731	+		PS417_00470	0.79	-0.6
93,732	-		PS417_00470	0.79	-0.6
93,915	+				+0.2
93,915	+				-0.6
93,915	+				-0.8
93,915	+				+0.2
93,915	+				+1.7
93,916	-				-2.5
93,916	-				-0.6
93,916	-				+0.2
94,072	+				-0.5
94,725	-		PS417_00475	0.50	+0.2
94,725	-		PS417_00475	0.50	+1.7
94,886	+		PS417_00475	0.63	+1.0
94,909	+		PS417_00475	0.65	+0.6
95,207	+		PS417_00475	0.90	+1.0
95,207	+		PS417_00475	0.90	-2.5
95,207	+		PS417_00475	0.90	-0.4
95,208	-		PS417_00475	0.90	+0.2
95,208	-		PS417_00475	0.90	-0.3
95,208	-		PS417_00475	0.90	-0.8
95,223	-				+0.1
95,318	+				-2.3
95,319	-				+0.2
95,374	+				-0.2
95,375	-				-0.5
95,375	-				-0.2
95,698	+		PS417_00480	0.42	-0.9
95,699	-		PS417_00480	0.42	+0.1
95,717	+		PS417_00480	0.45	+2.5
95,768	+		PS417_00480	0.54	+0.7
95,821	+		PS417_00480	0.62	-1.6
96,018	+				-1.4
96,019	-				-0.2
96,030	+				-0.2