Strain Fitness in Pseudomonas simiae WCS417 around PS417_28515

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
6,156,817	-				-1.8
6,156,817	-				+1.0
6,156,987	+		PS417_28510	0.22	+0.5
6,156,987	+		PS417_28510	0.22	+0.8
6,157,155	+		PS417_28510	0.43	-1.3
6,157,159	-		PS417_28510	0.43	+0.9
6,157,159	-		PS417_28510	0.43	-0.3
6,157,251	+		PS417_28510	0.55	-0.8
6,157,387	-		PS417_28510	0.72	-0.2
6,157,387	-		PS417_28510	0.72	-1.4
6,157,431	+		PS417_28510	0.77	-0.3
6,157,601	+				-0.6
6,157,650	-				-0.1
6,157,730	+		PS417_28515	0.15	+0.9
6,158,139	+		PS417_28515	0.79	-1.7
6,158,139	+		PS417_28515	0.79	-1.9
6,158,140	-		PS417_28515	0.79	-1.4