Strain Fitness in Pseudomonas simiae WCS417 around PS417_28430

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
6,135,085	+				-1.7
6,135,085	+				+3.0
6,135,130	+				-0.4
6,135,342	+		PS417_28425	0.40	-0.7
6,135,363	+		PS417_28425	0.44	-0.6
6,135,363	+		PS417_28425	0.44	+0.7
6,135,364	-		PS417_28425	0.44	-0.7
6,135,586	+		PS417_28425	0.79	-0.6
6,135,646	-		PS417_28425	0.89	-0.2
6,135,761	+				+0.4
6,135,762	-				-0.5
6,135,762	-				-0.9
6,135,762	-				+0.3
6,135,762	-				-0.3
6,135,766	+				+1.7
6,135,967	+				-0.8
6,136,002	+				+1.2
6,136,002	+				-1.3
6,136,017	+				+0.1
6,136,050	+				+0.4
6,136,081	-				-0.7
6,136,272	+				-0.6
6,136,272	+				-0.3
6,136,272	+				+0.0
6,136,273	-				-0.6
6,136,319	-				-0.3
6,136,329	+				+0.7
6,136,329	+				+0.1
6,136,466	-		PS417_28430	0.12	-0.3
6,136,466	-		PS417_28430	0.12	+2.2
6,136,570	-		PS417_28430	0.13	+0.9
6,136,573	+		PS417_28430	0.13	+0.2
6,136,573	+		PS417_28430	0.13	-0.2
6,136,638	-		PS417_28430	0.15	-1.4
6,136,638	-		PS417_28430	0.15	+1.8
6,136,802	-		PS417_28430	0.17	-0.9
6,136,875	+		PS417_28430	0.19	+0.5
6,136,875	+		PS417_28430	0.19	-0.4
6,136,876	-		PS417_28430	0.19	-1.1
6,137,007	+		PS417_28430	0.21	+0.8
6,137,008	-		PS417_28430	0.21	+1.7
6,137,008	-		PS417_28430	0.21	+0.4
6,137,008	-		PS417_28430	0.21	+3.0
6,137,011	+		PS417_28430	0.21	-0.6
6,137,011	+		PS417_28430	0.21	+2.3
6,137,011	+		PS417_28430	0.21	-2.0
6,137,012	-		PS417_28430	0.21	+0.7
6,137,012	-		PS417_28430	0.21	-0.8
6,137,012	-		PS417_28430	0.21	-0.3
6,137,376	+		PS417_28430	0.27	+0.3
6,137,377	-		PS417_28430	0.27	-1.1
6,137,460	+		PS417_28430	0.29	-1.6
6,137,493	-		PS417_28430	0.29	-2.9
6,137,553	+		PS417_28430	0.30	+0.5
6,137,553	+		PS417_28430	0.30	-0.1
6,137,553	+		PS417_28430	0.30	+0.1
6,137,553	+		PS417_28430	0.30	-0.2
6,137,553	+		PS417_28430	0.30	+2.4
6,137,554	-		PS417_28430	0.30	-0.2
6,137,554	-		PS417_28430	0.30	-0.2
6,137,554	-		PS417_28430	0.30	-0.9
6,137,554	-		PS417_28430	0.30	+0.8
6,137,554	-		PS417_28430	0.30	-0.9
6,137,554	-		PS417_28430	0.30	-1.9
6,137,554	-		PS417_28430	0.30	+0.1
6,137,554	-		PS417_28430	0.30	-1.3
6,137,554	-		PS417_28430	0.30	-2.6
6,137,712	+		PS417_28430	0.33	+0.4
6,137,712	+		PS417_28430	0.33	-0.3
6,137,712	+		PS417_28430	0.33	-1.7
6,137,713	-		PS417_28430	0.33	+0.4
6,137,713	-		PS417_28430	0.33	+0.0
6,137,713	-		PS417_28430	0.33	+0.2
6,137,713	-		PS417_28430	0.33	+0.3
6,137,716	+		PS417_28430	0.33	-0.3
6,137,716	+		PS417_28430	0.33	-2.8
6,137,863	-		PS417_28430	0.36	-0.4
6,138,060	+		PS417_28430	0.39	-0.9
6,138,463	+		PS417_28430	0.46	+0.4
6,138,463	+		PS417_28430	0.46	-0.8
6,138,540	+		PS417_28430	0.47	-0.4
6,138,576	+		PS417_28430	0.48	+0.6
6,138,576	+		PS417_28430	0.48	-0.6
6,138,681	+		PS417_28430	0.50	+0.5
6,138,681	+		PS417_28430	0.50	+1.3
6,138,681	+		PS417_28430	0.50	-0.8
6,138,682	-		PS417_28430	0.50	-1.0
6,138,682	-		PS417_28430	0.50	+0.1
6,138,717	+		PS417_28430	0.50	-0.3
6,138,718	-		PS417_28430	0.50	-0.2
6,138,718	-		PS417_28430	0.50	+0.8
6,138,718	-		PS417_28430	0.50	-1.1
6,138,723	+		PS417_28430	0.50	-0.6
6,138,723	+		PS417_28430	0.50	+0.5
6,138,723	+		PS417_28430	0.50	+0.8
6,138,723	+		PS417_28430	0.50	-1.5
6,138,724	-		PS417_28430	0.50	+0.0
6,138,954	+		PS417_28430	0.54	-0.4
6,138,954	+		PS417_28430	0.54	+0.7
6,138,954	+		PS417_28430	0.54	+0.3
6,138,955	-		PS417_28430	0.54	+0.2
6,138,955	-		PS417_28430	0.54	+0.1
6,138,996	+		PS417_28430	0.55	-1.4
6,138,997	-		PS417_28430	0.55	-4.2
6,138,999	-		PS417_28430	0.55	-1.7
6,139,039	-		PS417_28430	0.56	-0.2
6,139,039	-		PS417_28430	0.56	+1.3
6,139,119	+		PS417_28430	0.57	-0.6
6,139,119	+		PS417_28430	0.57	-0.3
6,139,119	+		PS417_28430	0.57	-1.8
6,139,119	+		PS417_28430	0.57	+0.5
6,139,120	-		PS417_28430	0.57	+0.4
6,139,120	-		PS417_28430	0.57	+0.1
6,139,164	+		PS417_28430	0.58	+0.9
6,139,164	+		PS417_28430	0.58	+0.5
6,139,164	+		PS417_28430	0.58	-0.3
6,139,164	+		PS417_28430	0.58	-0.5
6,139,165	-		PS417_28430	0.58	-1.6
6,139,165	-		PS417_28430	0.58	-0.4
6,139,165	-		PS417_28430	0.58	-1.0
6,139,481	+		PS417_28430	0.63	-1.3
6,139,568	-		PS417_28430	0.65	-0.8
6,139,620	-		PS417_28430	0.66	-2.0
6,139,679	+		PS417_28430	0.67	-0.7
6,139,687	+		PS417_28430	0.67	-0.8
6,139,831	+		PS417_28430	0.70	-1.4
6,139,832	-		PS417_28430	0.70	-0.9
6,140,148	+		PS417_28430	0.75	-1.1
6,140,346	+		PS417_28430	0.78	+1.5
6,140,346	+		PS417_28430	0.78	-0.4
6,140,425	-		PS417_28430	0.80	-1.3
6,140,425	-		PS417_28430	0.80	-0.7
6,140,425	-		PS417_28430	0.80	-0.2
6,140,485	-		PS417_28430	0.81	+0.3
6,140,493	+		PS417_28430	0.81	+1.2
6,140,493	+		PS417_28430	0.81	-1.1
6,140,494	-		PS417_28430	0.81	-1.3
6,140,494	-		PS417_28430	0.81	-2.8
6,140,543	-		PS417_28430	0.82	-0.6
6,140,616	+		PS417_28430	0.83	-0.6
6,140,616	+		PS417_28430	0.83	-1.2
6,140,617	-		PS417_28430	0.83	-0.2
6,140,617	-		PS417_28430	0.83	-0.3
6,140,617	-		PS417_28430	0.83	-0.9
6,140,617	-		PS417_28430	0.83	-2.9
6,140,617	-		PS417_28430	0.83	-1.4
6,140,709	+		PS417_28430	0.85	+0.7
6,140,709	+		PS417_28430	0.85	+0.4
6,140,710	-		PS417_28430	0.85	+0.2
6,140,710	-		PS417_28430	0.85	-0.2
6,140,713	-		PS417_28430	0.85	-2.0
6,140,713	-		PS417_28430	0.85	+0.6
6,140,713	-		PS417_28430	0.85	+0.1
6,140,781	+		PS417_28430	0.86	+0.7
6,140,781	+		PS417_28430	0.86	+0.5
6,140,781	+		PS417_28430	0.86	-0.1
6,140,781	+		PS417_28430	0.86	-0.3
6,140,782	-		PS417_28430	0.86	-2.1
6,140,782	-		PS417_28430	0.86	-0.1
6,140,782	-		PS417_28430	0.86	+1.7
6,140,785	+		PS417_28430	0.86	+0.3
6,140,785	+		PS417_28430	0.86	-0.0
6,140,786	-		PS417_28430	0.86	-0.6
6,140,786	-		PS417_28430	0.86	+0.7
6,140,786	-		PS417_28430	0.86	+0.8
6,140,786	-		PS417_28430	0.86	-2.3
6,140,789	+		PS417_28430	0.86	+0.3
6,140,789	+		PS417_28430	0.86	+0.8
6,140,790	-		PS417_28430	0.86	-0.5
6,140,880	+		PS417_28430	0.88	+0.4
6,140,881	-		PS417_28430	0.88	+0.4
6,141,043	-				+0.8
6,141,043	-				+0.2
6,141,120	+				+1.7
6,141,214	+				+1.1
6,141,214	+				+0.3
6,141,215	-				-0.4
6,141,264	+				-0.3
6,141,264	+				-1.6
6,141,327	+				-0.6
6,141,328	-				-0.6
6,141,372	-				+2.0
6,141,409	-				+0.3
6,141,418	+				-2.6
6,141,419	-				-0.1
6,141,419	-				+0.8
6,141,419	-				+0.5
6,141,419	-				-0.8
6,141,419	-				-0.1
6,141,441	+				-1.0
6,141,442	-				-1.1
6,141,463	+				-1.4
6,141,464	-				+0.0
6,141,464	-				+0.0
6,141,540	+				-2.0
6,141,540	+				+0.5
6,141,541	-				-0.8
6,141,571	+				-0.6
6,141,571	+				-0.5
6,141,571	+				+1.1
6,141,830	-		PS417_28435	0.11	-0.6
6,141,883	+		PS417_28435	0.13	-1.1
6,141,883	+		PS417_28435	0.13	+1.1
6,141,883	+		PS417_28435	0.13	-1.5
6,141,884	-		PS417_28435	0.13	-1.5
6,141,884	-		PS417_28435	0.13	+0.2
6,142,016	-				-0.6
6,142,043	-		PS417_28435	0.20	-2.2
6,142,102	+		PS417_28435	0.23	-0.5
6,142,392	-		PS417_28435	0.35	-0.4
6,142,528	+		PS417_28435	0.41	-1.2
6,142,528	+		PS417_28435	0.41	+0.5
6,142,528	+		PS417_28435	0.41	+0.3
6,142,529	-		PS417_28435	0.41	+0.1
6,142,529	-		PS417_28435	0.41	-1.2