Strain Fitness in Pseudomonas simiae WCS417 around PS417_28370

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
6,121,784	+		PS417_28360	0.36	-0.3
6,121,883	+		PS417_28360	0.48	-2.6
6,121,883	+		PS417_28360	0.48	+0.2
6,121,883	+		PS417_28360	0.48	+0.7
6,121,884	-		PS417_28360	0.48	+0.2
6,121,884	-		PS417_28360	0.48	+0.1
6,121,884	-		PS417_28360	0.48	-0.6
6,122,180	+		PS417_28360	0.83	-2.0
6,122,181	-		PS417_28360	0.83	+5.6
6,122,207	+		PS417_28360	0.86	+0.9
6,122,267	+				-0.7
6,122,268	-				+0.1
6,122,268	-				-0.1
6,122,268	-				-1.5
6,122,281	+				-3.4
6,122,316	+				+1.0
6,122,316	+				-0.6
6,122,317	-				-0.1
6,122,322	+				+0.2
6,122,323	-				+0.2
6,122,323	-				-0.3
6,122,323	-				+0.6
6,122,534	-		PS417_28365	0.57	+0.1
6,122,648	+				-0.7
6,122,649	-				+1.5
6,122,649	-				-0.3
6,122,649	-				+0.1
6,122,707	+				-1.7
6,122,707	+				+1.7
6,122,747	+				-0.2
6,122,759	+				-0.1
6,122,839	-				+0.1
6,123,208	+		PS417_28370	0.24	+1.5
6,123,897	+		PS417_28370	0.60	+0.2
6,123,897	+		PS417_28370	0.60	+1.3
6,123,897	+				-0.3
6,123,897	+		PS417_28370	0.60	-1.6
6,123,898	-		PS417_28370	0.60	-0.1
6,123,898	-		PS417_28370	0.60	+1.3
6,123,899	+		PS417_28370	0.60	-1.4
6,123,899	+		PS417_28370	0.60	-0.1
6,123,899	+		PS417_28370	0.60	-1.2
6,123,899	+		PS417_28370	0.60	-2.5
6,123,899	+		PS417_28370	0.60	+0.4
6,123,900	-		PS417_28370	0.61	+1.8
6,123,900	-		PS417_28370	0.61	+1.5
6,124,318	+		PS417_28370	0.83	-0.6
6,124,448	+		PS417_28370	0.90	-0.2
6,125,051	+		PS417_28375	0.40	-0.7
6,125,154	-		PS417_28375	0.50	-0.4
6,125,156	+		PS417_28375	0.50	+1.0
6,125,157	-		PS417_28375	0.50	+1.0
6,125,270	-		PS417_28375	0.61	+0.4
6,125,270	-		PS417_28375	0.61	-0.1
6,125,596	-				+0.6
6,125,608	+				+0.1