Strain Fitness in Pseudomonas simiae WCS417 around PS417_27990

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
6,039,458	+				-0.6
6,039,459	-		PS417_27985	0.50	+0.0
6,039,668	+		PS417_27985	0.61	-0.5
6,039,668	+		PS417_27985	0.61	+0.6
6,039,669	-		PS417_27985	0.61	-0.8
6,039,669	-		PS417_27985	0.61	+0.7
6,039,839	+		PS417_27985	0.70	-2.0
6,039,840	-		PS417_27985	0.70	-0.0
6,039,980	+		PS417_27985	0.77	-1.9
6,039,980	+		PS417_27985	0.77	-0.7
6,039,981	-		PS417_27985	0.77	-1.4
6,039,981	-		PS417_27985	0.77	+0.1
6,039,981	-		PS417_27985	0.77	+0.3
6,039,982	+		PS417_27985	0.77	+1.0
6,040,274	+				+0.9
6,040,274	+				+1.9
6,040,274	+				-0.4
6,040,275	-				+0.4
6,040,507	-		PS417_27990	0.16	+1.1
6,040,637	-		PS417_27990	0.46	+1.6
6,040,754	+		PS417_27990	0.73	-0.2
6,040,787	-		PS417_27990	0.80	+0.3
6,040,884	+				-0.9
6,040,884	+				-0.3
6,040,885	-				-0.2
6,040,885	-				+0.3
6,040,992	+				-0.9
6,041,700	+		PS417_27995	0.19	-1.6
6,041,729	+		PS417_27995	0.19	-1.4
6,041,738	-		PS417_27995	0.19	-1.7