Strain Fitness in Pseudomonas simiae WCS417 around PS417_27975

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
6,033,902	+		PS417_27970	0.60	+0.1
6,033,903	-		PS417_27970	0.60	+0.5
6,033,903	-		PS417_27970	0.60	+0.1
6,033,945	-		PS417_27970	0.62	-0.3
6,034,013	+		PS417_27970	0.66	+0.6
6,034,013	+		PS417_27970	0.66	-0.5
6,034,014	-		PS417_27970	0.66	+1.3
6,034,014	-		PS417_27970	0.66	-2.1
6,034,191	+		PS417_27970	0.75	-1.1
6,034,191	+		PS417_27970	0.75	-2.6
6,034,261	-		PS417_27970	0.79	+2.7
6,034,280	+		PS417_27970	0.80	-1.5
6,034,281	-		PS417_27970	0.80	-0.7
6,034,340	+		PS417_27970	0.83	+1.1
6,034,444	-		PS417_27970	0.89	-2.5
6,034,548	-				+0.2
6,034,924	+		PS417_27975	0.30	-0.1
6,035,221	+		PS417_27975	0.58	-2.5
6,035,251	+		PS417_27975	0.61	-1.1
6,035,398	+		PS417_27975	0.75	-0.0
6,035,399	-		PS417_27975	0.75	-1.7
6,035,595	-				+0.3
6,035,699	+				-0.1
6,035,700	-				+0.1
6,035,993	+		PS417_27980	0.13	-0.5
6,036,105	-		PS417_27980	0.17	+0.0
6,036,528	+		PS417_27980	0.33	-0.6
6,036,529	-		PS417_27980	0.33	+0.6