Strain Fitness in Pseudomonas simiae WCS417 around PS417_27870

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
6,005,938	+				-2.1
6,005,955	+				-1.5
6,005,956	-				-1.1
6,005,956	-				+0.4
6,006,305	+		PS417_27865	0.40	-0.4
6,006,305	+		PS417_27865	0.40	-1.7
6,006,306	-		PS417_27865	0.40	-1.0
6,006,306	-		PS417_27865	0.40	-0.4
6,006,857	+				-0.7
6,006,857	+				+1.1
6,006,857	+				+1.0
6,007,246	+		PS417_27870	0.18	-2.5
6,007,247	-		PS417_27870	0.18	-0.9
6,008,119	-		PS417_27870	0.60	-2.4
6,008,321	-		PS417_27870	0.70	+1.7
6,008,383	+		PS417_27870	0.73	-2.2
6,008,384	-		PS417_27870	0.73	+1.7
6,008,526	-		PS417_27870	0.80	-0.9
6,008,831	+				-0.3
6,008,957	-				+1.8
6,008,978	+				+1.7
6,009,007	+				+2.8
6,009,038	+				+0.6
6,009,038	+				+1.3
6,009,039	-				+1.6
6,009,039	-				+1.2
6,009,039	-				+2.7
6,009,039	-				+1.9
6,009,052	+				+1.0
6,009,207	+				+1.9
6,009,208	-				+1.7
6,009,401	+		PS417_27875	0.24	+1.8
6,009,791	+		PS417_27875	0.51	+2.0
6,009,791	+		PS417_27875	0.51	+1.8