Strain Fitness in Pseudomonas simiae WCS417 around PS417_27415

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,914,088	+		PS417_27410	0.70	-0.6
5,914,088	+		PS417_27410	0.70	+0.3
5,914,102	+		PS417_27410	0.71	-1.3
5,914,103	-		PS417_27410	0.71	-2.1
5,914,103	-		PS417_27410	0.71	+1.9
5,914,171	-		PS417_27410	0.73	-0.1
5,914,215	+		PS417_27410	0.75	-0.5
5,914,232	+		PS417_27410	0.76	-0.1
5,914,267	+		PS417_27410	0.77	-0.6
5,914,269	+		PS417_27410	0.77	-1.6
5,914,322	+		PS417_27410	0.79	-0.9
5,914,323	-		PS417_27410	0.79	+0.2
5,914,330	-		PS417_27410	0.80	-0.0
5,914,330	-		PS417_27410	0.80	+0.8
5,914,409	+		PS417_27410	0.83	+0.7
5,914,410	-		PS417_27410	0.83	+2.0
5,914,677	+				-0.6
5,914,677	+				+1.8
5,914,678	-				-1.1
5,914,820	-				-2.8
5,914,820	-				+0.1
5,914,835	-				-0.6
5,914,923	-				+1.0
5,915,017	+		PS417_27415	0.22	+1.4
5,915,018	-		PS417_27415	0.22	+0.5
5,915,018	-		PS417_27415	0.22	+0.8
5,915,018	-		PS417_27415	0.22	+1.2
5,915,018	-		PS417_27415	0.22	-2.7
5,915,061	+		PS417_27415	0.29	-1.3
5,915,061	+		PS417_27415	0.29	+1.4
5,915,062	-		PS417_27415	0.29	+2.1
5,915,062	-		PS417_27415	0.29	+0.3
5,915,213	+		PS417_27415	0.53	+1.0
5,915,306	+		PS417_27415	0.68	+1.3
5,915,404	-		PS417_27415	0.83	-2.7
5,915,418	+		PS417_27415	0.86	+0.6
5,915,418	+		PS417_27415	0.86	-0.5
5,915,418	+		PS417_27415	0.86	+1.3
5,915,419	-		PS417_27415	0.86	-0.5
5,915,419	-		PS417_27415	0.86	+0.7
5,915,451	-				+3.1
5,915,552	+				+0.1
5,915,553	-				+0.5
5,915,614	-				+1.2
5,915,643	-				-0.6
5,915,672	-				+0.2
5,915,707	+				+0.6
5,915,707	+				+0.6
5,915,711	+				+0.6
5,915,711	+				+1.2
5,915,711	+				+1.0
5,915,711	+				-2.2
5,915,711	+				+0.0
5,915,711	+				-2.1
5,915,712	-				-0.2
5,915,718	-				+0.7
5,915,937	+		PS417_27420	0.35	-0.3
5,915,938	-		PS417_27420	0.35	+1.1
5,915,988	-		PS417_27420	0.43	+0.5
5,916,026	+		PS417_27420	0.49	+0.1
5,916,026	+		PS417_27420	0.49	+1.7
5,916,026	+		PS417_27420	0.49	-0.1
5,916,027	-		PS417_27420	0.49	-0.7
5,916,237	+		PS417_27420	0.81	-1.9
5,916,262	-		PS417_27420	0.85	+0.9
5,916,271	+		PS417_27420	0.86	-0.8
5,916,272	-		PS417_27420	0.86	-1.1
5,916,360	+				+0.4
5,916,361	-				-0.6
5,916,427	+				+0.1
5,916,441	-				-1.0