Strain Fitness in Pseudomonas simiae WCS417 around PS417_26405

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,708,883	-		PS417_26390	0.82	+1.7
5,708,885	+		PS417_26390	0.82	+1.1
5,708,922	-				-1.5
5,709,126	+		PS417_26395	0.55	-0.5
5,709,206	+		PS417_26395	0.82	+0.6
5,709,206	+		PS417_26395	0.82	-2.4
5,709,216	-		PS417_26395	0.86	+0.6
5,709,303	+				-0.8
5,709,304	-				-0.2
5,709,313	-				-1.6
5,709,357	+		PS417_26400	0.16	-0.0
5,709,373	-		PS417_26400	0.19	-0.7
5,709,493	+		PS417_26400	0.43	-0.6
5,709,494	-		PS417_26400	0.43	-1.8
5,709,636	+		PS417_26400	0.71	-0.2
5,709,637	-		PS417_26400	0.72	+0.6
5,709,895	+				+0.6
5,709,959	+				+0.4
5,709,994	+				-1.3
5,710,159	+		PS417_26405	0.16	+1.1
5,710,159	+		PS417_26405	0.16	+0.6
5,710,159	+		PS417_26405	0.16	+0.6
5,710,160	-		PS417_26405	0.16	-2.5
5,710,160	-		PS417_26405	0.16	+0.1
5,710,160	-		PS417_26405	0.16	+0.7
5,710,160	-		PS417_26405	0.16	+0.1
5,710,387	+		PS417_26405	0.27	+1.1
5,710,387	+		PS417_26405	0.27	-0.6
5,710,388	-		PS417_26405	0.27	-0.2
5,710,624	-		PS417_26405	0.38	+0.8
5,710,627	-		PS417_26405	0.38	+0.6
5,710,663	-		PS417_26405	0.40	-0.3
5,710,663	-		PS417_26405	0.40	+0.1
5,710,996	-		PS417_26405	0.56	+0.6
5,710,996	-		PS417_26405	0.56	+1.4
5,711,167	+		PS417_26405	0.64	+0.9
5,711,237	+		PS417_26405	0.67	+1.0
5,711,238	-		PS417_26405	0.67	+1.1
5,711,312	+		PS417_26405	0.71	+0.8
5,711,312	+		PS417_26405	0.71	+0.4
5,711,312	+		PS417_26405	0.71	+0.4
5,711,489	+		PS417_26405	0.79	-0.0
5,711,489	+		PS417_26405	0.79	+1.9
5,711,489	+		PS417_26405	0.79	+1.7
5,711,490	-		PS417_26405	0.79	-0.2
5,711,653	+		PS417_26405	0.87	-0.9
5,711,666	-		PS417_26405	0.88	-0.2
5,711,929	+				-0.3
5,711,929	+				+0.7
5,711,929	+				-0.1
5,711,929	+				+1.4
5,711,930	-				-1.4
5,711,930	-				-0.1
5,711,930	-				+1.2
5,712,026	+				-0.3
5,712,027	-				-1.9
5,712,154	+				+0.7
5,712,176	+				-0.3
5,712,176	+				+0.2
5,712,176	+				+0.7
5,712,176	+				+0.1
5,712,177	-				-0.6
5,712,221	+				-0.3
5,712,221	+				-0.5
5,712,333	+		PS417_26410	0.14	+0.3
5,712,406	-		PS417_26410	0.25	-1.6
5,712,452	+		PS417_26410	0.32	+0.8
5,712,453	-		PS417_26410	0.32	-1.9
5,712,552	+		PS417_26410	0.47	+0.1
5,712,552	+		PS417_26410	0.47	+0.7
5,712,553	-		PS417_26410	0.47	-1.8
5,712,585	+		PS417_26410	0.52	-0.0
5,712,586	-		PS417_26410	0.52	-1.9
5,712,708	+		PS417_26410	0.71	-0.1
5,712,708	+		PS417_26410	0.71	-1.4
5,712,708	+		PS417_26410	0.71	-0.3
5,712,708	+		PS417_26410	0.71	+0.1
5,712,708	+		PS417_26410	0.71	+3.3
5,712,708	+		PS417_26410	0.71	-2.0
5,712,709	-		PS417_26410	0.71	+0.1
5,712,709	-		PS417_26410	0.71	-0.6
5,712,747	+		PS417_26410	0.77	+0.0
5,712,748	-		PS417_26410	0.77	-1.0
5,712,808	-		PS417_26410	0.86	+1.5
5,712,808	-		PS417_26410	0.86	-0.5
5,712,825	+		PS417_26410	0.88	+0.8
5,712,825	+		PS417_26410	0.88	+1.4
5,712,826	-		PS417_26410	0.88	+0.6
5,712,826	-		PS417_26410	0.88	+1.2
5,712,826	-		PS417_26410	0.88	+1.7
5,712,826	-		PS417_26410	0.88	+1.0
5,712,826	-		PS417_26410	0.88	-0.2
5,712,905	-				+0.9