Strain Fitness in Pseudomonas simiae WCS417 around PS417_26280

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,678,464	+				+0.8
5,678,527	+		PS417_26275	0.13	-0.5
5,678,769	+		PS417_26275	0.39	-0.6
5,678,769	+		PS417_26275	0.39	-1.0
5,678,770	-		PS417_26275	0.39	+2.7
5,678,770	-		PS417_26275	0.39	-0.3
5,679,342	+				-0.3
5,679,343	-				+0.1
5,679,396	+				-0.4
5,679,397	-				-1.6
5,679,841	+		PS417_26280	0.48	+0.1
5,679,841	+		PS417_26280	0.48	+1.7
5,679,842	-		PS417_26280	0.48	-1.3
5,679,842	-		PS417_26280	0.48	-0.4
5,679,850	-		PS417_26280	0.49	-0.7
5,680,358	-				-0.9
5,680,962	-		PS417_26285	0.53	+0.6
5,681,156	+		PS417_26285	0.73	+0.1
5,681,156	+		PS417_26285	0.73	+1.0
5,681,157	-		PS417_26285	0.73	+0.7
5,681,157	-		PS417_26285	0.73	-0.1
5,681,234	+		PS417_26285	0.81	+0.5
5,681,235	-		PS417_26285	0.81	-0.1
5,681,235	-		PS417_26285	0.81	-0.3