Strain Fitness in Pseudomonas simiae WCS417 around PS417_24650

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,349,088	-		PS417_24650	0.30	-0.5
5,349,100	+				+1.2
5,349,100	+		PS417_24650	0.31	-2.1
5,349,611	+				-1.6
5,349,637	+				+0.3
5,349,637	+				-0.8
5,349,637	+				+0.8
5,349,652	+				+0.8
5,349,653	-				+2.1
5,349,682	+				-0.2
5,349,692	+				+0.1
5,349,693	-				-1.7
5,349,726	-				-0.3
5,349,726	-				+0.3
5,349,869	+		PS417_24655	0.46	+0.3
5,349,869	+		PS417_24655	0.46	+2.1
5,350,001	+		PS417_24655	0.87	-0.2
5,350,001	+		PS417_24655	0.87	-0.0
5,350,001	+		PS417_24655	0.87	-1.4
5,350,002	-		PS417_24655	0.87	-0.5
5,350,061	+				+0.0
5,350,061	+				+1.0
5,350,062	-				-0.7
5,350,062	-				+1.3
5,350,173	+				-1.7
5,350,173	+				-0.7
5,350,173	+				+0.7
5,350,173	+				-1.9
5,350,173	+				-0.7
5,350,173	+				+0.7
5,350,173	+				-1.2
5,350,173	+				-0.9
5,350,173	+				+0.1
5,350,284	+				-0.9