Strain Fitness in Pseudomonas simiae WCS417 around PS417_23285

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
5,040,914	-				-0.6
5,040,914	-				-0.1
5,040,914	-				-1.4
5,040,916	-				+0.0
5,040,916	-				+0.8
5,041,059	-		PS417_23280	0.73	-1.9
5,041,072	-				+0.6
5,041,072	-				-0.5
5,041,072	-				+0.2
5,041,072	-				+0.5
5,041,072	-				-0.3
5,041,072	-				+0.3
5,041,100	-				-0.4
5,041,100	-				+0.2
5,041,104	-				-2.0
5,041,104	-				+0.6
5,041,104	-				-0.1
5,041,104	-				+1.6
5,041,179	-				-0.3
5,041,179	-				-0.8
5,041,179	-				+2.2
5,041,179	-				-1.0
5,041,179	-				+0.5
5,041,179	-				+0.0
5,041,179	-				+0.2
5,041,179	-				-1.0
5,041,179	-				-2.3
5,042,941	-				-0.4
5,042,941	-				-0.1
5,042,941	-				+0.2
5,042,969	+				+1.2
5,043,059	-				+0.8
5,043,184	+				-0.7
5,043,201	+				-0.5
5,043,201	+				+1.0
5,043,230	-				-0.2
5,043,241	-				-0.4
5,043,269	+				+0.7
5,043,480	-		PS417_23290	0.23	-0.4
5,043,505	+		PS417_23290	0.31	-0.4
5,043,505	+		PS417_23290	0.31	-0.9
5,043,506	-		PS417_23290	0.31	+0.9
5,043,506	-		PS417_23290	0.31	-0.3
5,043,620	+		PS417_23290	0.66	-0.4
5,043,620	+		PS417_23290	0.66	-1.9
5,043,620	+		PS417_23290	0.66	-1.5
5,043,712	+				-1.6
5,043,713	-				-0.6
5,043,728	+				-1.2
5,043,729	-				+0.8
5,043,729	-				-2.1
5,043,731	-				-1.5