Strain Fitness in Pseudomonas simiae WCS417 around PS417_23065

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,998,620	+				+0.4
4,998,989	+		PS417_23060	0.42	-0.9
4,998,990	-		PS417_23060	0.42	+0.9
4,999,009	-		PS417_23060	0.44	-0.6
4,999,065	+		PS417_23060	0.52	+0.0
4,999,065	+		PS417_23060	0.52	-0.4
4,999,065	+		PS417_23060	0.52	-0.0
4,999,327	-		PS417_23060	0.86	+0.0
4,999,327	-		PS417_23060	0.86	-0.3
4,999,375	+				-0.8
4,999,375	+				-0.6
4,999,375	+				-1.1
4,999,375	+				-2.3
4,999,375	+				-0.4
4,999,375	+				-0.9
4,999,375	+				-1.4
4,999,376	-				-0.7
4,999,376	-				+0.4
4,999,411	+				-1.6
4,999,412	-				+0.0
4,999,672	+		PS417_23065	0.12	+0.8
4,999,790	+		PS417_23065	0.33	-2.0
4,999,862	+		PS417_23065	0.46	+1.4
4,999,862	+		PS417_23065	0.46	-0.9
4,999,862	+		PS417_23065	0.46	+2.3
4,999,862	+		PS417_23065	0.46	-0.8
4,999,863	-		PS417_23065	0.46	-0.2
4,999,878	-		PS417_23065	0.49	+0.3
4,999,901	-				+0.6
4,999,921	+		PS417_23065	0.57	+0.2
4,999,921	+		PS417_23065	0.57	+0.2
4,999,922	-		PS417_23065	0.57	+1.2
4,999,922	-		PS417_23065	0.57	+0.5
4,999,985	-		PS417_23065	0.68	+0.1
4,999,985	-		PS417_23065	0.68	+2.6
5,000,014	-		PS417_23065	0.73	+0.4
5,000,014	-		PS417_23065	0.73	+0.3
5,000,078	+		PS417_23065	0.85	-0.5
5,000,117	+				+0.2
5,000,227	-				+1.8
5,000,382	+				-0.7
5,000,383	-				-0.7
5,000,385	-				-0.3
5,000,387	-				+1.4