Strain Fitness in Pseudomonas simiae WCS417 around PS417_22830

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,946,195	-		PS417_22825	0.16	-2.0
4,946,298	+		PS417_22825	0.26	+0.2
4,946,389	+		PS417_22825	0.36	+0.1
4,946,439	+		PS417_22825	0.41	+0.0
4,946,439	+		PS417_22825	0.41	-2.8
4,946,544	+		PS417_22825	0.52	-0.1
4,946,834	-		PS417_22825	0.83	+0.3
4,947,015	-				-0.2
4,947,016	+				+0.5
4,947,016	+				-0.2
4,947,017	-				-1.6
4,947,068	+				-0.4
4,947,166	+				-0.6
4,947,167	-				-0.5
4,947,248	+		PS417_22830	0.11	+1.0
4,947,342	-		PS417_22830	0.20	+0.6
4,947,363	+		PS417_22830	0.22	+0.6
4,947,363	+		PS417_22830	0.22	+0.3
4,947,363	+		PS417_22830	0.22	-0.3
4,947,363	+		PS417_22830	0.22	-0.8
4,947,364	-		PS417_22830	0.22	-0.2
4,947,395	-		PS417_22830	0.25	+0.7
4,947,395	-		PS417_22830	0.25	-0.4
4,947,395	-		PS417_22830	0.25	+1.1
4,947,438	-		PS417_22830	0.29	-0.3
4,947,438	-		PS417_22830	0.29	-0.4
4,947,438	-		PS417_22830	0.29	+1.3
4,947,455	-		PS417_22830	0.31	+0.7
4,947,645	+		PS417_22830	0.49	+0.5
4,947,807	+		PS417_22830	0.64	+0.1
4,947,808	-		PS417_22830	0.64	-0.5
4,947,867	-		PS417_22830	0.70	-0.0
4,947,867	-		PS417_22830	0.70	-0.1
4,947,905	+		PS417_22830	0.73	-0.6
4,947,945	+		PS417_22830	0.77	+0.0
4,947,945	+		PS417_22830	0.77	+0.2
4,947,945	+		PS417_22830	0.77	-1.5
4,947,945	+		PS417_22830	0.77	+2.4
4,947,947	+		PS417_22830	0.77	+0.2
4,947,947	+		PS417_22830	0.77	+1.1
4,947,947	+		PS417_22830	0.77	+1.1
4,947,948	-		PS417_22830	0.77	-1.2
4,947,948	-		PS417_22830	0.77	-0.9
4,947,948	-		PS417_22830	0.77	+0.6
4,948,032	-		PS417_22830	0.85	+0.0
4,948,032	-				+0.6
4,948,047	-		PS417_22830	0.87	+0.3
4,948,145	+				-0.7
4,948,146	-				+0.2
4,948,188	+				-0.2
4,948,188	+				-0.1
4,948,189	-				-0.4
4,948,190	+				+1.0
4,948,237	+				-0.6
4,948,237	+				+0.2
4,948,237	+				+1.3
4,948,238	-				-2.0
4,948,239	+				-1.1
4,948,240	-				-0.2
4,948,242	-				-0.5
4,948,242	-				+1.7
4,948,599	+				-0.1
4,948,647	+				-0.7
4,948,648	-				+0.2
4,948,685	+				+0.3
4,948,772	-		PS417_22840	0.27	+0.8
4,948,772	-		PS417_22840	0.27	-0.6
4,948,954	+				-0.1
4,949,024	+				+0.7
4,949,034	+				-0.1
4,949,056	-				-0.6