Strain Fitness in Pseudomonas simiae WCS417 around PS417_22565

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,885,512	+		PS417_22555	0.72	-1.1
4,885,513	-				+3.4
4,885,577	+		PS417_22555	0.75	+0.3
4,885,578	-		PS417_22555	0.75	+0.4
4,885,578	-		PS417_22555	0.75	+0.7
4,886,234	+				-0.9
4,886,235	-				+0.5
4,886,235	-				-2.5
4,886,262	-				+1.4
4,886,489	-		PS417_22565	0.22	-0.8
4,887,227	+				-2.4
4,887,228	-				+0.3
4,887,258	+				-2.4
4,887,261	+				+1.0
4,887,261	+				-1.4
4,887,283	+				-0.9
4,887,286	-				+1.1
4,887,408	-				+0.5
4,887,411	+				-5.0
4,887,427	+				-1.0
4,887,448	+				+0.2
4,887,449	-				+1.1
4,887,451	+				+0.3
4,887,451	+				-0.3
4,887,483	+				+0.6
4,887,483	+				+0.2
4,887,487	+				-1.2
4,887,488	-				+2.1
4,887,539	-		PS417_22570	0.10	+1.6
4,887,936	+				+0.4
4,887,937	-				+0.1
4,887,974	-				-0.8
4,887,974	-				-0.8
4,887,998	+				-1.6
4,888,087	-				-1.0