Strain Fitness in Pseudomonas simiae WCS417 around PS417_21830

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,739,460	+		PS417_21825	0.22	+0.4
4,739,516	+				-0.8
4,739,516	+		PS417_21825	0.27	+0.5
4,739,516	+		PS417_21825	0.27	+0.0
4,739,516	+		PS417_21825	0.27	+0.5
4,739,516	+		PS417_21825	0.27	-0.0
4,739,517	-		PS417_21825	0.27	+0.0
4,739,517	-		PS417_21825	0.27	+0.5
4,739,517	-		PS417_21825	0.27	+0.1
4,739,517	-		PS417_21825	0.27	-0.2
4,739,517	-		PS417_21825	0.27	-0.4
4,739,517	-		PS417_21825	0.27	-0.3
4,739,517	-		PS417_21825	0.27	-3.4
4,739,517	-		PS417_21825	0.27	-0.2
4,739,588	+		PS417_21825	0.34	-0.8
4,739,874	-		PS417_21825	0.61	-0.9
4,740,154	-		PS417_21825	0.88	+0.3
4,740,154	-		PS417_21825	0.88	-0.2
4,740,154	-		PS417_21825	0.88	-0.1
4,740,154	-		PS417_21825	0.88	-0.2
4,740,281	+				-0.6
4,740,282	-				-0.0
4,740,282	-				+0.6
4,740,294	+				-0.9
4,740,295	-				-0.4
4,740,295	-				-0.2
4,740,326	+				-0.3
4,740,327	-				-3.0
4,740,544	+		PS417_21830	0.22	-0.3
4,740,921	+		PS417_21830	0.83	-0.3
4,740,922	-		PS417_21830	0.83	-1.6
4,741,113	-				-0.2
4,741,137	-				-1.5
4,741,146	+				-0.2
4,741,147	-				-0.6
4,741,147	-				+0.2
4,741,147	-				-0.0
4,741,195	+				-0.2
4,741,195	+				-0.9
4,741,196	-				-0.2
4,741,261	+				+1.5
4,741,261	+				-0.1
4,741,262	-				+0.7
4,741,262	-				-1.5
4,741,265	+				+0.6
4,741,265	+				-0.3
4,741,266	-				-0.5
4,741,266	-				-0.6
4,741,451	+		PS417_21835	0.22	-0.4
4,741,451	+		PS417_21835	0.22	-0.1
4,741,452	-		PS417_21835	0.22	+1.0
4,741,631	-		PS417_21835	0.39	+0.8
4,741,664	+		PS417_21835	0.42	-0.2
4,741,664	+		PS417_21835	0.42	-0.5
4,741,691	+		PS417_21835	0.45	+1.0
4,741,719	-		PS417_21835	0.48	+0.3
4,741,733	-		PS417_21835	0.49	-0.6
4,741,925	-		PS417_21835	0.67	+0.1