Strain Fitness in Pseudomonas simiae WCS417 around PS417_21505

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,668,851	+		PS417_21500	0.52	+3.8
4,668,852	-		PS417_21500	0.52	-1.0
4,669,251	+		PS417_21500	0.82	-2.2
4,669,252	-		PS417_21500	0.82	-2.6
4,669,461	+				+0.1
4,669,462	-				+0.8
4,669,462	-				+0.5
4,669,473	+				-0.2
4,669,473	+				+1.0
4,669,529	-				-0.4
4,669,601	+				+0.5
4,669,846	+				-0.2
4,669,907	+				+1.0
4,669,907	+				+1.3
4,670,030	+		PS417_21505	0.20	-0.9
4,670,031	-		PS417_21505	0.20	-0.3
4,670,133	+		PS417_21505	0.30	+0.2
4,670,136	+		PS417_21505	0.30	-0.6
4,670,136	+		PS417_21505	0.30	-0.1
4,670,137	-		PS417_21505	0.30	-0.6
4,670,141	+		PS417_21505	0.31	+0.2
4,670,149	-		PS417_21505	0.31	-0.2
4,670,357	+		PS417_21505	0.52	-1.0
4,670,538	+				+0.6
4,670,697	-		PS417_21505	0.86	+0.3
4,670,839	+				-1.0
4,670,895	+				-3.2
4,671,813	+		PS417_21510	0.63	-0.1