Strain Fitness in Pseudomonas simiae WCS417 around PS417_20720

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,503,232	+		PS417_20715	0.81	-1.0
4,503,233	-		PS417_20715	0.81	-3.8
4,503,238	+		PS417_20715	0.82	+1.1
4,503,239	-		PS417_20715	0.82	-2.2
4,503,406	+				-0.2
4,503,511	+				-0.4
4,503,665	+				+0.8
4,503,708	+				+0.6
4,503,708	+				-1.6
4,503,708	+				+0.5
4,503,708	+				+1.6
4,503,786	+				-0.2
4,503,787	-				+1.3
4,503,792	+				+0.8
4,503,792	+				+0.8
4,503,800	-				+1.6
4,503,994	-		PS417_20720	0.16	-0.9
4,503,997	-		PS417_20720	0.16	-0.2
4,504,183	-		PS417_20720	0.29	-0.4
4,504,233	+		PS417_20720	0.33	-1.6
4,504,234	-		PS417_20720	0.33	+0.6
4,504,512	+		PS417_20720	0.52	-1.6
4,504,711	-		PS417_20720	0.66	-1.9
4,504,848	+				+1.6
4,504,944	+		PS417_20720	0.82	-3.1
4,504,945	-		PS417_20720	0.82	+0.6
4,505,061	+				-1.2
4,505,118	+				+0.3
4,505,119	-				-1.2
4,505,376	-		PS417_20725	0.29	-1.1
4,505,573	+		PS417_20725	0.61	-3.2
4,505,983	+				-0.1
4,506,020	-				-1.6
4,506,146	-		PS417_20735	0.15	-0.9