Strain Fitness in Pseudomonas simiae WCS417 around PS417_19610

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,264,339	+		PS417_19600	0.56	-1.7
4,264,340	-		PS417_19600	0.57	-2.1
4,264,573	+				-0.4
4,264,599	-				+0.1
4,264,625	-				-0.8
4,264,625	-				-0.5
4,264,631	-				+1.5
4,264,725	-				-0.4
4,264,729	+				-2.0
4,264,729	+				-1.8
4,264,730	-				-1.0
4,264,730	-				-0.1
4,264,782	-				-3.2
4,264,782	-				-0.4
4,264,782	-				-0.5
4,264,862	+		PS417_19605	0.35	-0.9
4,264,863	-		PS417_19605	0.35	-1.3
4,265,025	-				-1.5
4,265,115	-				-0.1
4,265,211	-		PS417_19610	0.12	-2.7
4,265,863	+				-0.5
4,265,897	+				+1.9
4,265,898	-				-2.6
4,265,954	+				-0.5
4,266,107	+		PS417_19615	0.16	-0.5
4,266,107	+		PS417_19615	0.16	-1.8
4,266,107	+				+0.5
4,266,107	+		PS417_19615	0.16	-1.2
4,266,107	+		PS417_19615	0.16	-0.8
4,266,108	-		PS417_19615	0.16	-2.2
4,266,108	-		PS417_19615	0.16	-0.1
4,266,108	-		PS417_19615	0.16	+0.4
4,266,500	+		PS417_19615	0.58	-0.2
4,266,500	+		PS417_19615	0.58	-1.3
4,266,501	-		PS417_19615	0.58	-3.3
4,266,606	-		PS417_19615	0.69	-0.2
4,266,619	-		PS417_19615	0.71	+0.9
4,266,871	+				-0.5