Strain Fitness in Pseudomonas simiae WCS417 around PS417_19595

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,261,414	+		PS417_19590	0.28	+0.4
4,261,414	+		PS417_19590	0.28	-0.6
4,261,490	-		PS417_19590	0.38	+1.7
4,261,595	-		PS417_19590	0.52	-0.5
4,261,952	+				-1.3
4,262,069	+				-2.2
4,262,176	-				-1.3
4,262,206	+				+1.1
4,262,206	+				+1.3
4,262,259	+				+0.8
4,262,259	+				-0.1
4,262,260	-				-0.1
4,262,260	-				+1.5
4,262,883	+		PS417_19595	0.43	+0.3
4,262,883	+		PS417_19595	0.43	+1.2
4,262,883	+		PS417_19595	0.43	+0.2
4,262,884	-		PS417_19595	0.43	-0.7
4,262,934	+		PS417_19595	0.46	-0.8
4,263,219	+		PS417_19595	0.61	+1.0
4,263,302	+		PS417_19595	0.65	-1.7
4,263,303	-		PS417_19595	0.65	-1.4
4,263,396	-		PS417_19595	0.70	-0.8
4,263,472	-		PS417_19595	0.74	-0.4
4,263,472	-		PS417_19595	0.74	-0.5
4,263,685	+		PS417_19595	0.85	-1.2
4,263,907	+				-1.2
4,263,907	+				-0.6
4,263,908	-				-1.3
4,263,908	-				-0.1
4,263,965	-				-0.9
4,263,975	-				+1.2
4,263,995	-				-1.3
4,264,018	-				-1.8
4,264,051	-				-1.6
4,264,339	+		PS417_19600	0.56	-1.7
4,264,340	-		PS417_19600	0.57	-2.1
4,264,573	+				-0.4
4,264,599	-				+0.1
4,264,625	-				-0.8
4,264,625	-				-0.5
4,264,631	-				+1.5
4,264,725	-				-0.4
4,264,729	+				-2.0
4,264,729	+				-1.8
4,264,730	-				-1.0
4,264,730	-				-0.1
4,264,782	-				-3.2
4,264,782	-				-0.4
4,264,782	-				-0.5
4,264,862	+		PS417_19605	0.35	-0.9
4,264,863	-		PS417_19605	0.35	-1.3