Strain Fitness in Pseudomonas simiae WCS417 around PS417_19190

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,158,322	-		PS417_19185	0.76	-0.2
4,158,327	+		PS417_19185	0.76	-0.1
4,158,327	+		PS417_19185	0.76	-0.7
4,158,328	-		PS417_19185	0.76	-0.3
4,158,355	+		PS417_19185	0.77	-0.1
4,158,356	-		PS417_19185	0.77	-0.2
4,158,356	-		PS417_19185	0.77	+0.4
4,158,516	+		PS417_19185	0.82	+1.1
4,158,516	+		PS417_19185	0.82	+0.6
4,158,516	+		PS417_19185	0.82	-0.1
4,158,516	+		PS417_19185	0.82	-2.6
4,158,517	-		PS417_19185	0.82	+1.6
4,158,610	-		PS417_19185	0.85	+2.5
4,158,616	+		PS417_19185	0.86	+0.5
4,158,617	-		PS417_19185	0.86	+1.6
4,158,681	+		PS417_19185	0.88	+0.3
4,158,681	+		PS417_19185	0.88	-2.1
4,158,681	+		PS417_19185	0.88	-0.1
4,158,682	-		PS417_19185	0.88	-1.2
4,158,690	+		PS417_19185	0.88	-0.3
4,158,816	+				-1.7
4,158,967	-				-0.1
4,159,010	-				-0.9
4,159,039	+				-0.1
4,159,040	-				-0.3
4,159,112	-				+1.5
4,159,233	+		PS417_19190	0.23	-1.7
4,159,234	-		PS417_19190	0.23	-0.0
4,159,234	-		PS417_19190	0.23	-0.8
4,159,287	+		PS417_19190	0.41	-0.3
4,159,288	-		PS417_19190	0.41	-1.8
4,159,382	-		PS417_19190	0.73	-1.5
4,159,771	-		PS417_19195	0.57	+0.6
4,159,771	-		PS417_19195	0.57	-0.2
4,159,851	+		PS417_19195	0.73	+1.5
4,159,852	-		PS417_19195	0.73	-0.1
4,159,852	-		PS417_19195	0.73	+0.7
4,159,852	-		PS417_19195	0.73	-2.3
4,160,009	-				-0.1
4,160,020	+				-0.8
4,160,021	-				+0.1
4,160,021	-				+0.1
4,160,082	-				+0.0
4,160,082	-				+1.5
4,160,082	-				-0.3
4,160,125	-				+0.3
4,160,419	+		PS417_19200	0.17	-1.0
4,160,420	-		PS417_19200	0.17	+0.0