Strain Fitness in Pseudomonas simiae WCS417 around PS417_19040

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,119,464	+				-0.1
4,119,926	+				+0.5
4,119,929	+				+0.0
4,119,930	-				-0.1
4,120,003	+				-1.8
4,120,004	-				-0.8
4,120,007	+				-0.7
4,120,065	-				-1.5
4,120,065	-				+0.6
4,120,093	-				+0.3
4,120,185	+				+0.4
4,120,299	-		PS417_19040	0.17	+0.1
4,120,439	+		PS417_19040	0.27	-1.1
4,120,440	-		PS417_19040	0.27	-0.3
4,120,440	-		PS417_19040	0.27	-0.6
4,120,641	+		PS417_19040	0.41	-1.4
4,120,641	+		PS417_19040	0.41	+0.4
4,120,648	+		PS417_19040	0.41	+0.5
4,120,649	-		PS417_19040	0.41	-0.8
4,120,993	+		PS417_19040	0.65	-1.1
4,121,009	+		PS417_19040	0.66	-1.8
4,121,009	+		PS417_19040	0.66	-1.2
4,121,010	-		PS417_19040	0.66	-0.2
4,121,010	-		PS417_19040	0.66	-1.4
4,121,306	+		PS417_19040	0.86	-0.3
4,121,306	+		PS417_19040	0.86	-0.1
4,121,306	+		PS417_19040	0.86	-1.1
4,121,788	+		PS417_19045	0.23	-0.1
4,121,788	+		PS417_19045	0.23	-0.1
4,121,825	-		PS417_19045	0.26	-0.2
4,122,147	+		PS417_19045	0.51	+0.5
4,122,148	-		PS417_19045	0.51	+0.5
4,122,175	+		PS417_19045	0.54	-0.7
4,122,233	+		PS417_19045	0.58	+0.7
4,122,234	-		PS417_19045	0.58	-0.3
4,122,234	-		PS417_19045	0.58	-1.4
4,122,236	-		PS417_19045	0.58	+1.5
4,122,423	-		PS417_19045	0.73	-0.7