Strain Fitness in Pseudomonas simiae WCS417 around PS417_18980

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,108,088	-				-0.8
4,108,088	-				+0.5
4,108,129	+		PS417_18975	0.36	-0.7
4,108,130	-		PS417_18975	0.36	-0.3
4,108,130	-		PS417_18975	0.36	-0.2
4,108,401	+		PS417_18975	0.55	+0.5
4,108,579	+		PS417_18975	0.68	+0.2
4,108,617	+		PS417_18975	0.71	-0.0
4,108,618	-		PS417_18975	0.71	+0.2
4,109,055	+				-1.2
4,109,056	-				+1.0
4,109,546	-		PS417_18980	0.66	-1.3
4,109,546	-		PS417_18980	0.66	-0.9
4,109,738	-		PS417_18980	0.89	-0.1
4,109,945	-				-0.9
4,110,051	+				+0.4
4,110,052	-				-0.0
4,110,052	-				-1.1
4,110,052	-				+1.7
4,110,441	+		PS417_18990	0.26	-2.1
4,110,441	+		PS417_18990	0.26	-2.0
4,110,441	+		PS417_18990	0.26	-1.7
4,110,442	-		PS417_18990	0.26	-0.4
4,110,564	+		PS417_18990	0.36	-0.2
4,110,602	+		PS417_18990	0.39	-0.5