Strain Fitness in Pseudomonas simiae WCS417 around PS417_18890

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,089,555	-		PS417_18885	0.33	+0.8
4,089,555	-		PS417_18885	0.33	-1.7
4,089,638	-		PS417_18885	0.44	-2.0
4,090,010	+				+1.1
4,090,232	+				+0.0
4,090,232	+				-1.0
4,090,232	+				-1.1
4,090,232	+				+0.2
4,090,232	+				+1.5
4,090,233	-				-0.2
4,090,233	-				-0.6
4,090,233	-				+1.4
4,090,269	-				-0.4
4,090,359	-				-0.3
4,090,498	-				-0.1
4,090,734	+		PS417_18890	0.26	+0.0
4,090,734	+		PS417_18890	0.26	-4.1
4,090,735	-		PS417_18890	0.26	+0.4
4,090,735	-		PS417_18890	0.26	-0.6
4,090,735	-		PS417_18890	0.26	-0.3
4,090,791	+		PS417_18890	0.30	-0.3
4,090,794	+		PS417_18890	0.30	-0.5
4,091,163	+		PS417_18890	0.57	-2.1
4,091,187	+		PS417_18890	0.59	-0.3
4,091,196	-		PS417_18890	0.60	+0.4
4,091,298	+		PS417_18890	0.67	+0.5
4,091,298	+		PS417_18890	0.67	-0.8
4,091,390	+		PS417_18890	0.74	-0.3
4,091,745	+				+0.1
4,091,766	+				+0.0
4,091,766	+				-0.1
4,091,766	+				+0.6
4,091,767	-				+0.1
4,091,767	-				-1.0
4,091,767	-				+2.0
4,091,779	-				-0.5
4,091,987	-		PS417_18895	0.17	-1.6
4,092,206	-		PS417_18895	0.34	-0.2
4,092,206	-		PS417_18895	0.34	-0.3
4,092,206	-		PS417_18895	0.34	+0.2
4,092,206	-		PS417_18895	0.34	+1.6
4,092,343	+		PS417_18895	0.44	+1.5
4,092,343	+		PS417_18895	0.44	-0.8
4,092,512	+		PS417_18895	0.57	+0.3
4,092,513	-		PS417_18895	0.57	-0.2