Strain Fitness in Pseudomonas simiae WCS417 around PS417_18835

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
4,079,544	+		PS417_18825	0.52	+0.0
4,079,544	+		PS417_18825	0.52	-0.9
4,079,545	-		PS417_18825	0.52	-1.1
4,079,682	+		PS417_18825	0.74	+0.9
4,079,682	+		PS417_18825	0.74	+0.1
4,079,682	+				+1.5
4,079,682	+		PS417_18825	0.74	-1.0
4,079,682	+		PS417_18825	0.74	+0.0
4,079,682	+		PS417_18825	0.74	+1.1
4,079,683	-		PS417_18825	0.74	-0.5
4,079,683	-		PS417_18825	0.74	-0.1
4,079,880	-				-0.3
4,080,012	+				-1.1
4,080,012	+				-1.0
4,080,013	-				+0.6
4,080,263	+		PS417_18830	0.64	+0.8
4,080,264	-		PS417_18830	0.64	+1.2
4,080,887	-		PS417_18835	0.25	+2.2
4,081,170	+		PS417_18835	0.41	+1.2
4,081,313	+		PS417_18835	0.49	+0.6
4,081,313	+		PS417_18835	0.49	+0.2
4,081,313	+		PS417_18835	0.49	+0.7
4,081,623	+		PS417_18835	0.67	+1.3
4,081,623	+		PS417_18835	0.67	+0.1
4,081,623	+		PS417_18835	0.67	+1.5
4,081,712	+		PS417_18835	0.72	+0.6
4,081,712	+		PS417_18835	0.72	-0.8
4,081,713	-		PS417_18835	0.72	-3.3
4,081,713	-		PS417_18835	0.72	+0.5
4,081,789	+				-1.3
4,081,790	-		PS417_18835	0.77	+1.5
4,081,882	-		PS417_18835	0.82	-1.0
4,081,882	-		PS417_18835	0.82	+0.3
4,081,884	-		PS417_18835	0.82	+1.1
4,082,231	-				-0.2
4,082,233	+				+1.3
4,082,233	+				+2.2
4,082,234	-				-0.5
4,082,438	-				+1.2
4,082,712	+		PS417_18840	0.18	-1.0
4,082,713	-		PS417_18840	0.18	-0.2
4,083,022	-		PS417_18840	0.33	-0.6