Strain Fitness in Pseudomonas simiae WCS417 around PS417_18080

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,936,214	+		PS417_18070	0.26	-1.7
3,936,215	-				+0.7
3,936,510	-				+0.0
3,936,596	+		PS417_18075	0.16	-0.8
3,936,597	-		PS417_18075	0.16	-0.1
3,936,686	+		PS417_18075	0.39	-0.5
3,936,687	-		PS417_18075	0.39	-2.0
3,936,715	+		PS417_18075	0.46	+0.3
3,936,716	-		PS417_18075	0.46	+1.3
3,936,716	-		PS417_18075	0.46	+0.4
3,936,801	-		PS417_18075	0.68	-0.3
3,936,801	-		PS417_18075	0.68	-0.1
3,936,941	+				-0.2
3,936,941	+				-0.3
3,936,942	-				+0.9
3,936,943	+				-0.3
3,936,944	-				+0.0
3,936,944	-				+0.3
3,937,399	-		PS417_18080	0.39	-0.1
3,937,581	+		PS417_18080	0.54	-0.1
3,937,582	-		PS417_18080	0.54	-1.3
3,937,582	-		PS417_18080	0.54	+1.5
3,937,582	-		PS417_18080	0.54	+0.0
3,937,610	+		PS417_18080	0.56	-0.5
3,937,635	+		PS417_18080	0.58	-0.1
3,937,687	-		PS417_18080	0.63	+2.8
3,937,755	+		PS417_18080	0.68	+0.6
3,937,755	+		PS417_18080	0.68	+3.6
3,938,161	+				-0.1
3,938,161	+				-0.9
3,938,162	-				+0.2
3,938,162	-				+0.5
3,938,179	-				+1.8
3,938,181	+				-2.0
3,938,213	+				+0.1
3,938,339	+		PS417_18085	0.12	-0.0
3,938,501	+		PS417_18085	0.22	-0.6
3,938,501	+		PS417_18085	0.22	+0.4
3,938,502	-		PS417_18085	0.22	+1.5
3,938,810	+		PS417_18085	0.40	+0.2
3,938,810	+		PS417_18085	0.40	+0.2
3,938,811	-		PS417_18085	0.40	-0.4