Strain Fitness in Pseudomonas simiae WCS417 around PS417_17875

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,900,893	+		PS417_17865	0.73	-0.8
3,900,979	+		PS417_17865	0.84	+2.8
3,901,116	-				+0.6
3,901,116	-				-0.8
3,901,116	-				+2.1
3,901,473	+		PS417_17870	0.64	+2.3
3,901,652	-				-0.4
3,901,699	+				+1.7
3,901,701	+				+1.5
3,901,859	+				-0.4
3,901,860	-				+0.2
3,901,860	-				+1.5
3,901,862	+				-0.0
3,901,863	-				-0.1
3,901,881	-				+0.5
3,901,881	-				+0.2
3,902,180	+		PS417_17875	0.27	-0.1
3,902,180	+		PS417_17875	0.27	+1.5
3,902,181	-		PS417_17875	0.27	+0.7
3,902,181	-		PS417_17875	0.27	+0.5
3,902,217	-		PS417_17875	0.29	+1.4
3,902,477	+		PS417_17875	0.49	+1.1
3,902,478	-		PS417_17875	0.49	+0.3
3,903,012	-				+0.4
3,903,147	-				-1.8
3,903,241	-				+0.7
3,903,537	-		PS417_17880	0.73	-0.5
3,903,617	+				+0.3
3,903,617	+				+0.9
3,903,618	-				-1.5
3,903,630	+				-0.1
3,903,631	-				+0.1
3,903,632	+				-1.3
3,903,882	+		PS417_17885	0.28	+0.3