Strain Fitness in Pseudomonas simiae WCS417 around PS417_17800

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,885,047	+		PS417_17790	0.67	+0.5
3,885,048	-		PS417_17790	0.67	+1.0
3,885,192	-		PS417_17790	0.87	-0.5
3,885,223	+				+2.1
3,885,224	-				+0.6
3,885,573	+		PS417_17795	0.39	+0.6
3,885,735	+		PS417_17795	0.61	+0.0
3,885,853	-		PS417_17795	0.77	+0.3
3,886,322	-		PS417_17800	0.24	-0.1
3,886,460	+		PS417_17800	0.36	+0.5
3,886,531	-		PS417_17800	0.42	-0.4
3,886,612	+		PS417_17800	0.48	-1.0
3,886,825	+		PS417_17800	0.66	-0.3
3,886,826	-		PS417_17800	0.66	-0.5
3,886,841	+				-0.5
3,886,866	-		PS417_17800	0.70	+0.5
3,886,908	-		PS417_17800	0.73	-1.0
3,886,910	-		PS417_17800	0.73	-2.2
3,887,068	-		PS417_17800	0.87	-1.6
3,887,068	-		PS417_17800	0.87	-0.0
3,887,068	-		PS417_17800	0.87	-0.7
3,887,100	+		PS417_17800	0.89	+0.1
3,887,185	-				+0.4
3,887,442	+		PS417_17805	0.28	+0.8
3,887,443	-		PS417_17805	0.28	+0.4
3,887,445	-		PS417_17805	0.29	+1.0
3,887,488	-				+1.9
3,887,713	-				-0.5
3,887,713	-		PS417_17805	0.62	+0.4
3,888,048	-				-0.5
3,888,132	-		PS417_17810	0.13	-0.1
3,888,132	-		PS417_17810	0.13	-0.4