Strain Fitness in Pseudomonas simiae WCS417 around PS417_17720

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,866,707	+		PS417_17715	0.42	+1.6
3,866,708	-		PS417_17715	0.42	-1.7
3,866,728	+				+1.5
3,866,957	-		PS417_17715	0.58	-0.1
3,867,109	+		PS417_17715	0.68	-0.5
3,867,109	+		PS417_17715	0.68	+0.8
3,867,110	-		PS417_17715	0.68	-0.3
3,867,196	+		PS417_17715	0.74	-0.2
3,867,196	+		PS417_17715	0.74	-0.6
3,867,196	+		PS417_17715	0.74	-0.2
3,867,197	-		PS417_17715	0.74	+0.5
3,867,197	-		PS417_17715	0.74	-0.8
3,867,568	-				-0.9
3,867,587	-				+0.2
3,867,587	-				-0.1
3,867,587	-				-0.9
3,867,920	-		PS417_17720	0.30	-1.7
3,867,920	-		PS417_17720	0.30	-3.1
3,867,934	+		PS417_17720	0.31	-2.8
3,867,935	-				-0.3
3,868,164	-		PS417_17720	0.53	-1.5
3,868,262	-		PS417_17720	0.62	-1.0
3,868,331	-				+1.5
3,868,440	+				+1.5
3,868,441	-		PS417_17720	0.78	+0.7
3,868,447	+		PS417_17720	0.79	+1.1
3,868,551	+		PS417_17720	0.88	-1.5
3,868,551	+		PS417_17720	0.88	-0.8
3,868,706	+				-0.0
3,868,707	-				-0.4
3,868,761	+				-0.1
3,868,775	+				-0.8
3,868,963	+		PS417_17725	0.26	+0.1
3,869,003	+		PS417_17725	0.30	+0.3
3,869,004	-		PS417_17725	0.30	-1.7
3,869,075	+		PS417_17725	0.37	-0.1
3,869,075	+		PS417_17725	0.37	+0.5
3,869,114	+		PS417_17725	0.41	+2.3
3,869,115	-		PS417_17725	0.41	-0.1
3,869,126	+		PS417_17725	0.42	+1.5
3,869,126	+		PS417_17725	0.42	+0.6
3,869,127	-		PS417_17725	0.42	+1.5
3,869,231	+		PS417_17725	0.53	-0.8
3,869,300	+		PS417_17725	0.60	+0.3
3,869,365	+		PS417_17725	0.66	-1.0
3,869,673	+				+0.1