Strain Fitness in Pseudomonas simiae WCS417 around PS417_16100

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,529,188	+		PS417_16095	0.58	-1.4
3,529,243	-		PS417_16095	0.61	-1.1
3,529,254	+		PS417_16095	0.61	+0.9
3,529,737	+		PS417_16095	0.87	+2.0
3,529,738	-		PS417_16095	0.88	-0.4
3,529,966	+				+0.9
3,530,084	+		PS417_16100	0.20	-0.2
3,530,359	+		PS417_16100	0.67	-1.0
3,530,359	+		PS417_16100	0.67	+1.2
3,530,402	-		PS417_16100	0.74	+0.8
3,530,402	-		PS417_16100	0.74	-2.8
3,530,402	-		PS417_16100	0.74	-0.4
3,530,469	-		PS417_16100	0.86	+3.5
3,530,627	+				+1.6
3,530,627	+				+0.4
3,530,628	-				-0.2
3,530,628	-				+0.1
3,530,700	-				-0.7
3,530,758	+				+0.4
3,530,758	+				+1.9
3,530,758	+				-2.5
3,530,759	-				+0.9
3,530,993	+				+1.0
3,531,314	-		PS417_16105	0.37	-0.4
3,531,314	-				+1.4