Strain Fitness in Pseudomonas simiae WCS417 around PS417_16010

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,508,676	-		PS417_16005	0.59	+0.9
3,508,827	-		PS417_16005	0.70	+0.2
3,509,002	-		PS417_16005	0.84	-0.2
3,509,347	+				+0.1
3,509,347	+				-0.4
3,509,799	-		PS417_16010	0.36	+0.3
3,509,808	+		PS417_16010	0.37	+0.0
3,509,868	+		PS417_16010	0.42	+0.9
3,509,868	+		PS417_16010	0.42	+0.2
3,509,869	-		PS417_16010	0.42	+0.9
3,509,869	-				+1.4
3,509,871	+		PS417_16010	0.42	+0.1
3,509,872	-		PS417_16010	0.42	-0.4
3,509,931	+		PS417_16010	0.48	+1.4
3,509,988	+		PS417_16010	0.53	+0.7
3,509,989	-		PS417_16010	0.53	+0.1
3,510,360	+		PS417_16010	0.88	+0.2
3,510,375	-		PS417_16010	0.89	+1.4
3,510,525	+				-0.1
3,510,544	+				+0.3
3,510,759	+		PS417_16015	0.28	+0.3
3,510,792	-		PS417_16015	0.32	-0.3
3,510,881	-		PS417_16015	0.44	+0.2
3,511,031	-		PS417_16015	0.63	-1.9
3,511,039	+		PS417_16015	0.64	+0.2
3,511,040	-		PS417_16015	0.64	-0.5
3,511,192	+		PS417_16015	0.83	+0.3
3,511,192	+		PS417_16015	0.83	+1.1
3,511,193	-		PS417_16015	0.83	-1.1
3,511,214	-		PS417_16015	0.86	+1.8
3,511,352	-				-1.0