Strain Fitness in Pseudomonas simiae WCS417 around PS417_15275

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,350,463	+				+3.2
3,350,463	+				+0.2
3,350,463	+				+2.2
3,350,463	+				-0.4
3,350,463	+				+0.8
3,350,463	+				-0.2
3,350,463	+				+0.7
3,350,464	-				+0.1
3,350,464	-				+0.4
3,350,465	+				+1.1
3,350,465	+				+0.7
3,350,465	+				-0.5
3,350,465	+				-0.6
3,350,466	-				-0.1
3,350,466	-				-0.1
3,350,467	+				-0.4
3,350,468	-				+0.1
3,350,483	-				-0.1
3,350,855	+		PS417_15270	0.37	-3.4
3,350,855	+		PS417_15270	0.37	+0.0
3,350,855	+		PS417_15270	0.37	+0.5
3,350,856	-		PS417_15270	0.38	-1.1
3,350,859	+				+1.0
3,350,859	+				+1.0
3,350,859	+		PS417_15270	0.38	-0.2
3,350,859	+		PS417_15270	0.38	+0.7
3,350,859	+		PS417_15270	0.38	-1.3
3,350,860	-		PS417_15270	0.38	-1.9
3,351,041	+		PS417_15270	0.59	+0.2
3,351,257	+		PS417_15270	0.84	-1.1
3,351,396	+				-0.1
3,351,573	+		PS417_15275	0.13	+0.8
3,351,574	-		PS417_15275	0.13	+0.8
3,351,975	+		PS417_15275	0.43	+0.0
3,351,982	+		PS417_15275	0.44	+0.6
3,351,983	-		PS417_15275	0.44	+0.8
3,352,027	-				+3.0
3,352,246	+		PS417_15275	0.64	+1.0
3,352,710	-				-0.1
3,352,883	+		PS417_15280	0.34	-0.3
3,353,157	+				+0.4
3,353,158	-				-0.0
3,353,235	+				+0.7
3,353,350	+		PS417_15285	0.11	+0.1