Strain Fitness in Pseudomonas simiae WCS417 around PS417_15100

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,301,039	+		PS417_15090	0.84	+0.9
3,301,039	+		PS417_15090	0.84	-1.2
3,301,492	-		PS417_15095	0.62	-0.4
3,301,580	-		PS417_15095	0.80	+1.5
3,301,586	-		PS417_15095	0.81	-0.7
3,301,780	+				-0.3
3,302,108	-		PS417_15100	0.40	+0.5
3,302,350	+		PS417_15100	0.62	-0.8
3,302,473	+		PS417_15100	0.74	-0.8
3,303,121	+		PS417_15105	0.21	-0.1
3,303,121	+		PS417_15105	0.21	+0.0
3,303,121	+		PS417_15105	0.21	-0.5
3,303,121	+		PS417_15105	0.21	+1.5
3,303,122	-		PS417_15105	0.21	+0.0
3,303,122	-				+1.5
3,303,122	-		PS417_15105	0.21	+0.5
3,303,122	-		PS417_15105	0.21	-0.9
3,303,123	+		PS417_15105	0.21	-0.8
3,303,123	+		PS417_15105	0.21	-1.3
3,303,344	-		PS417_15105	0.34	-0.1
3,303,712	+		PS417_15105	0.55	-0.1