Strain Fitness in Pseudomonas simiae WCS417 around PS417_14850

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,244,170	-		PS417_14840	0.32	-1.1
3,244,221	-				+0.5
3,244,374	+		PS417_14840	0.59	-0.2
3,244,375	-		PS417_14840	0.59	+0.3
3,244,632	-				-1.2
3,244,632	-				+0.3
3,244,632	-				+1.3
3,244,641	-				-0.2
3,244,756	+		PS417_14845	0.16	-0.8
3,244,757	-		PS417_14845	0.16	-2.5
3,245,040	+		PS417_14845	0.76	+2.2
3,245,040	+		PS417_14845	0.76	-0.6
3,245,040	+				+0.5
3,245,041	-		PS417_14845	0.76	+0.2
3,245,074	-		PS417_14845	0.83	+1.2
3,245,074	-		PS417_14845	0.83	+0.2
3,245,134	-				-0.4
3,245,236	-		PS417_14850	0.40	-1.2
3,245,291	-		PS417_14850	0.65	+0.2
3,245,465	+				+0.0
3,245,465	+				+2.2
3,245,490	+				+0.7
3,245,733	-		PS417_14855	0.24	+0.4
3,245,837	+		PS417_14855	0.34	-1.5
3,245,934	-		PS417_14855	0.43	-1.1
3,245,975	+				-0.1
3,245,976	-		PS417_14855	0.47	-0.5
3,246,090	+				+0.5
3,246,090	+		PS417_14855	0.57	-2.7
3,246,091	-		PS417_14855	0.57	-2.1