Strain Fitness in Pseudomonas simiae WCS417 around PS417_14675

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,204,317	-				+1.5
3,204,329	+				+0.1
3,204,329	+				-0.2
3,204,330	-				-0.7
3,204,432	-		PS417_14670	0.17	-0.9
3,204,655	+				-1.7
3,204,656	-				+2.5
3,204,829	-				+1.3
3,204,829	-				-1.0
3,204,988	+		PS417_14675	0.12	+1.3
3,204,989	-		PS417_14675	0.12	+0.1
3,204,989	-		PS417_14675	0.12	+1.6
3,204,989	-		PS417_14675	0.12	+0.1
3,205,078	-		PS417_14675	0.19	-0.5
3,205,662	-		PS417_14675	0.59	-0.1
3,205,662	-		PS417_14675	0.59	+0.9
3,205,789	+		PS417_14675	0.68	-0.0
3,205,805	-		PS417_14675	0.69	+1.2
3,205,895	+		PS417_14675	0.76	+0.5
3,205,895	+		PS417_14675	0.76	+0.3
3,205,968	+				-0.5
3,206,220	+				+0.9
3,206,220	+				-1.1
3,206,221	-				+0.0
3,206,221	-				-1.1
3,206,221	-				-0.3
3,206,325	-				+1.7
3,206,564	+		PS417_14680	0.22	-0.2
3,206,656	+		PS417_14680	0.32	+0.0
3,206,681	+		PS417_14680	0.35	+0.3
3,206,682	-				-0.1
3,206,850	-		PS417_14680	0.54	+0.9
3,206,850	-		PS417_14680	0.54	+1.0
3,207,108	+		PS417_14680	0.82	+0.0
3,207,185	+				-0.1
3,207,185	+				+0.4
3,207,185	+				-0.4
3,207,186	-				-0.3