Strain Fitness in Pseudomonas simiae WCS417 around PS417_14645

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,198,019	-				-0.6
3,198,019	-				+0.6
3,198,504	-		PS417_14645	0.13	+0.2
3,198,543	-				+4.4
3,198,753	+		PS417_14645	0.24	+0.5
3,198,855	+		PS417_14645	0.29	+2.3
3,198,857	+		PS417_14645	0.29	+1.5
3,198,858	-		PS417_14645	0.29	-2.2
3,198,858	-		PS417_14645	0.29	+1.1
3,199,194	+		PS417_14645	0.44	+0.3
3,199,194	+		PS417_14645	0.44	+0.1
3,199,449	-		PS417_14645	0.56	-1.8
3,199,450	+		PS417_14645	0.56	+0.1
3,199,450	+		PS417_14645	0.56	+0.7
3,199,607	+		PS417_14645	0.63	+0.8
3,199,968	-		PS417_14645	0.79	-0.2
3,200,328	+				-1.0
3,200,329	-				+0.1
3,200,461	+				+0.1
3,200,461	+				+0.5
3,200,674	+				+1.7
3,200,674	+				+1.1
3,201,046	+		PS417_14650	0.30	-0.1
3,201,046	+		PS417_14650	0.30	-0.7
3,201,046	+		PS417_14650	0.30	-1.7
3,201,232	+		PS417_14650	0.42	+2.8
3,201,233	-		PS417_14650	0.42	-0.5
3,201,233	-		PS417_14650	0.42	+0.2
3,201,233	-		PS417_14650	0.42	-0.3
3,201,233	-		PS417_14650	0.42	-0.1