Strain Fitness in Pseudomonas simiae WCS417 around PS417_14175

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,105,905	+		PS417_14170	0.39	+0.0
3,106,023	-		PS417_14170	0.48	+0.3
3,106,023	-				+1.4
3,106,227	+		PS417_14170	0.64	+0.6
3,106,286	+		PS417_14170	0.68	+1.2
3,106,349	+		PS417_14170	0.73	-0.8
3,106,349	+		PS417_14170	0.73	-0.2
3,106,350	-		PS417_14170	0.73	-0.3
3,106,570	+				-1.2
3,106,629	+				-0.3
3,106,630	-				+0.6
3,106,630	-				+1.2
3,106,630	-				+1.4
3,106,884	+		PS417_14175	0.37	+0.7
3,106,885	-		PS417_14175	0.37	+0.3
3,106,940	-		PS417_14175	0.49	-1.9
3,106,940	-		PS417_14175	0.49	+1.8
3,106,940	-		PS417_14175	0.49	+1.5
3,107,270	+		PS417_14180	0.12	-1.6
3,107,888	+				+3.6
3,107,889	-				-0.2
3,108,104	-		PS417_14185	0.23	-2.2