Strain Fitness in Pseudomonas simiae WCS417 around PS417_13945

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
3,063,143	-				-0.3
3,063,176	+				+0.6
3,063,182	+				-0.1
3,063,201	-				+0.1
3,063,201	-				+0.0
3,063,355	+		PS417_13940	0.17	+1.4
3,063,355	+		PS417_13940	0.17	-0.4
3,063,356	-		PS417_13940	0.18	-2.2
3,063,356	-		PS417_13940	0.18	+0.1
3,063,480	+		PS417_13940	0.36	+0.0
3,063,615	+		PS417_13940	0.55	-0.2
3,063,715	+				+0.1
3,063,715	+		PS417_13940	0.70	+0.0
3,063,716	-		PS417_13940	0.70	-1.7
3,063,716	-				+0.8
3,063,716	-		PS417_13940	0.70	-1.9
3,063,985	+		PS417_13945	0.12	+2.9
3,064,285	-		PS417_13945	0.71	-1.2
3,064,360	+		PS417_13945	0.86	-0.1
3,064,360	+				+0.4
3,064,361	-		PS417_13945	0.86	-0.3
3,064,412	+				-0.8
3,064,412	+				+3.0
3,064,516	+				+0.6
3,064,572	+				-0.8
3,064,622	-				+2.4
3,064,774	+		PS417_13950	0.13	-0.4
3,064,775	-				+0.1
3,064,852	-		PS417_13950	0.21	+0.4
3,064,928	+				+1.4
3,065,204	+		PS417_13950	0.57	-0.2
3,065,205	-		PS417_13950	0.57	+1.7