Strain Fitness in Pseudomonas simiae WCS417 around PS417_13490

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,972,244	+		PS417_13485	0.49	+0.0
2,972,245	-		PS417_13485	0.49	-0.3
2,972,245	-		PS417_13485	0.49	+0.9
2,972,254	-		PS417_13485	0.50	+0.3
2,972,400	-		PS417_13485	0.60	+0.5
2,972,603	+		PS417_13485	0.75	+0.1
2,972,651	+		PS417_13485	0.78	+1.0
2,972,651	+		PS417_13485	0.78	+1.0
2,972,831	-				+1.1
2,972,843	-				+0.6
2,972,994	+				+0.8
2,973,122	+		PS417_13490	0.54	-1.2
2,973,123	-		PS417_13490	0.54	-0.7
2,973,337	+				+0.5
2,973,337	+				-2.2
2,973,338	-				+0.1
2,973,342	-				+0.2
2,973,342	-				+1.8
2,973,342	-				-1.6
2,973,439	+				-1.0
2,973,439	+				+0.3
2,973,443	-				-1.0
2,973,443	-				-0.8
2,973,619	+		PS417_13495	0.13	+1.9
2,973,619	+		PS417_13495	0.13	-0.9
2,973,620	-		PS417_13495	0.13	+1.9
2,973,693	-		PS417_13495	0.17	+0.1
2,973,869	-		PS417_13495	0.28	-1.5
2,973,970	+		PS417_13495	0.34	+0.6
2,973,970	+		PS417_13495	0.34	+0.0
2,973,970	+		PS417_13495	0.34	+0.9
2,973,971	-		PS417_13495	0.34	-0.8
2,974,122	+		PS417_13495	0.43	-0.1