Strain Fitness in Pseudomonas simiae WCS417 around PS417_13335

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,930,508	+		PS417_13330	0.59	-1.6
2,930,548	+		PS417_13330	0.61	-1.3
2,930,548	+		PS417_13330	0.61	-0.2
2,930,548	+		PS417_13330	0.61	-0.6
2,930,548	+		PS417_13330	0.61	-0.7
2,930,549	-		PS417_13330	0.62	-2.8
2,930,549	-		PS417_13330	0.62	-1.4
2,930,549	-		PS417_13330	0.62	+1.8
2,930,549	-		PS417_13330	0.62	+0.4
2,930,549	-		PS417_13330	0.62	-0.0
2,930,602	+		PS417_13330	0.65	+0.1
2,930,944	+		PS417_13330	0.85	-0.5
2,930,944	+		PS417_13330	0.85	-0.7
2,930,944	+		PS417_13330	0.85	-1.9
2,930,944	+		PS417_13330	0.85	-1.6
2,931,076	-				-0.4
2,931,100	+				-0.3
2,931,849	-		PS417_13335	0.35	+0.5
2,931,883	+		PS417_13335	0.39	+1.6
2,932,452	-				+1.6
2,932,664	-		PS417_13340	0.14	-1.2
2,932,664	-		PS417_13340	0.14	+0.2
2,932,686	-		PS417_13340	0.15	+0.4
2,932,932	+		PS417_13340	0.37	-0.6
2,933,050	+		PS417_13340	0.47	-1.8
2,933,163	+		PS417_13340	0.57	+1.4
2,933,164	-		PS417_13340	0.57	-0.6
2,933,164	-		PS417_13340	0.57	+0.9
2,933,167	+		PS417_13340	0.57	+1.0
2,933,167	+		PS417_13340	0.57	-0.8
2,933,168	-		PS417_13340	0.57	+1.4
2,933,168	-		PS417_13340	0.57	-0.3
2,933,168	-		PS417_13340	0.57	+0.5
2,933,311	+				-1.4