Strain Fitness in Pseudomonas simiae WCS417 around PS417_13010

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,841,034	+				+0.4
2,841,192	+				-0.7
2,841,498	+		PS417_13005	0.41	+0.0
2,841,498	+		PS417_13005	0.41	-1.4
2,841,499	-		PS417_13005	0.41	-0.8
2,841,794	+		PS417_13005	0.80	+0.5
2,841,956	+				+0.7
2,842,326	-		PS417_13010	0.46	-0.6
2,842,469	+		PS417_13010	0.64	-0.8
2,842,470	-		PS417_13010	0.65	-0.5
2,842,792	+				+1.4
2,842,798	+				-0.2
2,842,892	-		PS417_13015	0.13	-0.8
2,843,221	+		PS417_13015	0.42	+1.4
2,843,222	-		PS417_13015	0.42	-1.2
2,843,222	-		PS417_13015	0.42	-0.2
2,843,224	+		PS417_13015	0.42	-1.2
2,843,224	+		PS417_13015	0.42	-0.4
2,843,224	+		PS417_13015	0.42	-1.3
2,843,227	+		PS417_13015	0.42	+2.8
2,843,228	-		PS417_13015	0.42	-3.0
2,843,252	-		PS417_13015	0.44	-1.8
2,843,252	-		PS417_13015	0.44	+0.4
2,843,252	-		PS417_13015	0.44	-0.2
2,843,368	+		PS417_13015	0.55	+0.1
2,843,447	-		PS417_13015	0.62	+0.3
2,843,590	+		PS417_13015	0.74	+0.7
2,843,591	-		PS417_13015	0.74	-0.0