Strain Fitness in Pseudomonas simiae WCS417 around PS417_12735

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,776,297	-		PS417_12730	0.40	-0.2
2,776,297	-				-1.2
2,776,987	+				+0.1
2,777,151	+				-0.5
2,777,210	+				+0.4
2,777,211	-				-0.1
2,777,362	-		PS417_12735	0.28	+1.1
2,777,691	+				+0.1
2,777,695	+				-0.1
2,777,722	+				-1.3
2,777,722	+				-1.2
2,777,723	-				-0.1
2,777,755	+				-1.2
2,777,851	+				+0.2
2,777,852	-				+0.6
2,777,866	-				+0.7
2,777,876	+				-0.3
2,777,877	-				-1.2
2,777,880	+				+0.3
2,778,200	+		PS417_12740	0.19	+1.9
2,778,341	+		PS417_12740	0.29	+0.3
2,778,438	-		PS417_12740	0.37	-0.3
2,778,452	-		PS417_12740	0.38	+0.3
2,778,452	-		PS417_12740	0.38	+1.3