Strain Fitness in Pseudomonas simiae WCS417 around PS417_11775

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,561,382	+				-1.7
2,561,444	+				+0.2
2,561,922	+		PS417_11770	0.55	-1.2
2,561,922	+		PS417_11770	0.55	+2.7
2,561,955	+		PS417_11770	0.58	+0.1
2,561,955	+				-0.9
2,562,315	+				-0.3
2,562,316	-				-1.2
2,562,726	+		PS417_11775	0.32	+1.0
2,562,958	-		PS417_11775	0.53	+1.0
2,563,097	+		PS417_11775	0.65	-0.1
2,563,098	-		PS417_11775	0.66	+0.5
2,563,452	+				-0.3
2,563,472	+				-0.1
2,563,536	+				-1.3
2,563,536	+				-0.4
2,563,845	-		PS417_11780	0.40	-1.0
2,563,845	-		PS417_11780	0.40	-0.3
2,564,079	+		PS417_11780	0.66	+0.9
2,564,127	+		PS417_11780	0.72	+0.1
2,564,127	+		PS417_11780	0.72	-1.5
2,564,128	-		PS417_11780	0.72	+1.1
2,564,128	-		PS417_11780	0.72	-0.7
2,564,220	+		PS417_11780	0.82	+0.3
2,564,400	+				+1.6
2,564,401	-				-0.9
2,564,431	+				-0.7
2,564,431	+				-0.0
2,564,432	-				+0.2
2,564,432	-				+0.2