Strain Fitness in Pseudomonas simiae WCS417 around PS417_11475

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,468,933	-		PS417_11465	0.59	-0.2
2,469,257	+				-0.6
2,469,437	+				-0.3
2,469,437	+				-1.9
2,469,438	-				-0.7
2,469,438	-				+2.0
2,469,438	-				+1.1
2,469,726	+		PS417_11470	0.59	-0.5
2,469,727	-		PS417_11470	0.59	+1.3
2,469,727	-		PS417_11470	0.59	+0.1
2,469,727	-		PS417_11470	0.59	+0.2
2,470,168	+		PS417_11475	0.52	-1.3
2,470,168	+		PS417_11475	0.52	-0.8
2,470,169	-		PS417_11475	0.53	-0.2
2,470,169	-		PS417_11475	0.53	-1.8
2,470,675	-				-2.6
2,470,703	-		PS417_11480	0.11	+0.4
2,470,730	+				+2.4
2,470,731	-		PS417_11480	0.21	+1.1
2,470,788	-		PS417_11480	0.42	-3.0
2,470,902	+		PS417_11480	0.84	-0.6
2,470,998	+				+1.8
2,470,999	-				-0.2
2,471,057	-				-1.8
2,471,159	-				+2.4
2,471,173	+		PS417_11485	0.11	-0.9
2,471,347	+		PS417_11485	0.33	-1.8
2,471,347	+		PS417_11485	0.33	+0.8