Strain Fitness in Pseudomonas simiae WCS417 around PS417_11415

Experiment: P. simiae OR Antrim MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	P. simiae OR Antrim MOI 1
2,455,662	+				-0.9
2,455,662	+				+1.4
2,455,662	+				-0.8
2,455,663	-				+0.8
2,455,663	-				-0.2
2,455,663	-				+0.4
2,455,663	-				+0.0
2,455,728	+				-1.0
2,455,755	+				+0.2
2,455,755	+				-0.6
2,455,756	-				+0.1
2,456,270	+		PS417_11410	0.80	+0.1
2,456,270	+		PS417_11410	0.80	-0.1
2,456,426	+				+0.8
2,456,427	-				-0.9
2,456,491	-		PS417_11415	0.12	-1.1
2,456,778	-		PS417_11415	0.64	-1.2
2,456,844	-		PS417_11415	0.75	-0.4
2,457,047	+				-1.9
2,457,282	-		PS417_11420	0.13	+0.8
2,457,815	-		PS417_11420	0.42	+0.1
2,457,917	+		PS417_11420	0.48	+0.4